RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 DHRS4L1P0CG22 281 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 RPA3P35244 121 aaPredicted RBP11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MSH2P43246 934 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 PTPN9P43378 593 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 RPL34P49207 117 aaKnown RBP11.21□□□□□ -0.61
CCDC172-201ENST00000333254 NDST1P52848 882 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 CDH6P55285 790 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 DYNLT1P63172 113 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 SLC18A2Q05940 514 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 IRF5Q13568 498 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 SETDB1Q15047 1291 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 SLC45A4Q5BKX6 768 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 FAM133BQ5BKY9 247 aaKnown RBP11.21□□□□□ -0.61
CCDC172-201ENST00000333254 KCNT1Q5JUK3 1230 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 HHATQ5VTY9 493 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MTHFD1LQ6UB35 978 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MAMDC4Q6UXC1 1216 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 C3orf62Q6ZUJ4 267 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 SESTD1Q86VW0 696 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 PALM2Q8IXS6 379 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MCUQ8NE86 351 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 C10orf82Q8WW14 230 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 SLC44A1Q8WWI5 657 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 RXFP2Q8WXD0 754 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 KLHL29Q96CT2 875 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 HEXIM2Q96MH2 286 aaKnown RBP11.21□□□□□ -0.61
CCDC172-201ENST00000333254 TMEM237Q96Q45 408 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MAK16Q9BXY0 300 aaKnown RBP11.21□□□□□ -0.61
CCDC172-201ENST00000333254 LRMDAQ9H2I8 198 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MLXIPLQ9NP71 852 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 MKS1Q9NXB0 559 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 TSPAN16Q9UKR8 245 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 TRAFD1O14545 582 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 TRDMT1O14717 391 aaKnown RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SPAG7O75391 227 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 ZNF189O75820 626 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CYP2C8P10632 490 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 EZRP15311 586 aaKnown RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CYP3A5P20815 502 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SSTR1P30872 391 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SLC6A3Q01959 620 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SLC1A5Q15758 541 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 TRNP1Q6NT89 227 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 OLFML1Q6UWY5 402 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 FAM183BPQ6ZVS7 135 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 AGGF1Q8N302 714 aaeCLIP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 ZNF276Q8N554 614 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CFAP61Q8NHU2 1237 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CDCA5Q96FF9 252 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CLMNQ96JQ2 1002 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 RAB3IPQ96QF0 476 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 C16orf70Q9BSU1 422 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CALN1Q9BXU9 219 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 KATNBL1Q9H079 304 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 USP29Q9HBJ7 922 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SAR1AQ9NR31 198 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 E5RJQ4 531 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 APOL1O14791 398 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 KLF11O14901 512 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 STRNO43815 780 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 TGDSO95455 350 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 PDGFRAP16234 1089 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 ZFXP17010 805 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 KRT4P19013 534 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 NR2C2P49116 596 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 NEK3P51956 506 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 DNAJC3Q13217 504 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SNAPC2Q13487 334 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 ZBTB6Q15916 424 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 FYB2Q5VWT5 728 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 OR6B2Q6IFH4 312 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 DARS2Q6PI48 645 aaKnown RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 LVRNQ6Q4G3 990 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 USP50Q70EL3 339 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 TBC1D1Q86TI0 1168 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CDR2LQ86X02 465 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 C4orf33Q8N1A6 199 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 FAM71DQ8N9W8 422 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 NLGN2Q8NFZ4 835 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 HSPH1Q92598 858 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 ZNF75CPQ92670 426 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CENPIQ92674 756 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 APOPT1Q96IL0 206 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 C11orf84Q9BUA3 381 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 DNAI2Q9GZS0 605 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 PCDH18Q9HCL0 1135 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 CD248Q9HCU0 757 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 PDGFCQ9NRA1 345 aa11.2□□□□□ -0.62
CCDC172-201ENST00000333254 SAE1Q9UBE0 346 aaPredicted RBP11.2□□□□□ -0.62
CCDC172-201ENST00000333254 PCSK1NQ9UHG2 260 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms