RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 CNTN1Q12860 1018 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PYDC2Q56P42 97 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FOXR1Q6PIV2 292 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 IL17REQ8NFR9 667 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 OR6Y1Q8NGX8 325 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PIH1D3Q9NQM4 214 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ZNF302Q9NR11 478 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CHST12Q9NRB3 414 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PSMD3O43242 534 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PCNAP12004 261 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GJB7Q6PEY0 223 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PYDC1Q8WXC3 89 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RIBC2Q9H4K1 309 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NUP50Q9UKX7 468 aa13.17□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TOP3BO95985 862 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ETS2P15036 469 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CYP4F2P78329 520 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CYP4F3Q08477 520 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TSNQ15631 228 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NAB2Q15742 525 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 UGP2Q16851 508 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CACHD1Q5VU97 1274 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SHQ1Q6PI26 577 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EID3Q8N140 333 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DUOX2Q9NRD8 1548 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NUP160Q12769 1436 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 LRRC20Q8TCA0 184 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TMEM138Q9NPI0 162 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TOPORSQ9NS56 1045 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MAFFQ9ULX9 164 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 C15orf41Q9Y2V0 281 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ABL2P42684 1182 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CYP2R1Q6VVX0 501 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 UBA3Q8TBC4 463 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GPR63Q9BZJ6 419 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ECE2O60344 883 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CIAO1O76071 339 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CPB1P15086 417 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ERCC2P18074 760 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FASP25445 335 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 HSF2Q03933 536 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 HMBOX1Q6NT76 420 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PPIL6Q8IXY8 311 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TTC29Q8NA56 475 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PSMA8Q8TAA3 256 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SLC9A7Q96T83 725 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 COMMD8Q9NX08 183 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PMF1-BGLAPU3KQ54 211 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MAP3K13O43283 966 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TGM2P21980 687 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 IST1P53990 364 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SLC34A1Q06495 639 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EPC2Q52LR7 807 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ERAP2Q6P179 960 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SLC13A5Q86YT5 568 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TOR3AQ9H497 397 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NPR2P20594 1047 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NOS3P29474 1203 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GPC1P35052 558 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 LY9Q9HBG7 655 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TRNAU1APQ9NX07 287 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ING3Q9NXR8 418 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 COPG2Q9UBF2 871 aa13.16□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TEX28O15482 410 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PTPN4P29074 926 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DENND1BQ6P3S1 775 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ATG4AQ8WYN0 398 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CST8O60676 142 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TRIM3O75382 744 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TDP2O95551 362 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CCDC157Q569K6 752 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 POLNQ7Z5Q5 900 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CCDC36Q8IYA8 594 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PI4K2AQ9BTU6 479 aa13.15□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MYLK2Q9H1R3 596 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms