RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 FCHO1O14526 889 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 PEX11AO75192 247 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 CIB2O75838 187 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 APOC2P02655 101 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 HMGCRP04035 888 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 OSBPP22059 807 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 TMEM62Q0P6H9 643 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 KHDC1Q4VXA5 237 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC45A4Q5BKX6 768 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 IER5Q5VY09 327 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 NAIF1Q69YI7 327 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 NLRP7Q8WX94 980 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 OTUD5Q96G74 571 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 THTPAQ9BU02 230 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 ZNF518BQ9C0D4 1074 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 UGT1A9O60656 530 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 P4HA1P13674 534 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 GPD1P21695 349 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SDC4P31431 198 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 EPHB1P54762 984 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 JADE1Q6IE81 842 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 TLDC1Q6P9B6 456 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 ZPBP2Q6X784 338 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 CCNYQ8ND76 341 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC7A6OSQ96CW6 309 aaPredicted RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 PIWIL1Q96J94 861 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 UGT1A7Q9HAW7 530 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 UGT1A10Q9HAW8 530 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 UGT1A8Q9HAW9 530 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 CYP4F11Q9HBI6 524 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 HESX1Q9UBX0 185 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SNX9Q9Y5X1 595 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 LACTBL1A8MY62 500 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 C2CD2LO14523 706 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 NVLO15381 856 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 MSCO60682 206 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 TOP3BO95985 862 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 VTNP04004 478 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 GM2AP17900 193 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SAT1P21673 171 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 RXRBP28702 533 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SKIV2L2P42285 1042 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 PDE1BQ01064 536 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 RASA2Q15283 850 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 NAT8LQ8N9F0 302 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 ALKBH8Q96BT7 664 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC5A4Q9NY91 659 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 DLGAP2Q9P1A6 1054 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 THSD7AQ9UPZ6 1657 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 A6NJR5 290 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SMIM24O75264 130 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 NDST1P52848 882 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC8A3P57103 927 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 MXD4Q14582 209 aaPredicted RBP13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 TREML2Q5T2D2 321 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 ACOT1Q86TX2 421 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 TDRPQ86YL5 185 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 NME8Q8N427 588 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 OR6B3Q8NGW1 331 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 TMEM176AQ96HP8 235 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 NMUR2Q9GZQ4 415 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
HMGCS1-201ENST00000325110 MEI4A8MW99 385 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 APOL1O14791 398 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 T-ENOLP0DO92 83 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 ADORA2BP29275 332 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 ASPAP45381 313 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC25A11Q02978 314 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 C16orf46Q6P387 395 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 TMEM154Q6P9G4 183 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 ADGRD1Q6QNK2 874 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 XYLT1Q86Y38 959 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 CRLF3Q8IUI8 442 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 ARFGAP1Q8N6T3 406 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 FAM172AQ8WUF8 416 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 APOPT1Q96IL0 206 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 CDT1Q9H211 546 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 BATF3Q9NR55 127 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 TSPAN16Q9UKR8 245 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 LTBP1Q14766 1721 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 A0A087WZ62 844 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 KIF1CO43896 1103 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 SNRPAP09012 282 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 AQP5P55064 265 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 SNX30Q5VWJ9 437 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 ARHGAP24Q8N264 748 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 INPP5DQ92835 1189 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 E2F7Q96AV8 911 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 CLPTM1LQ96KA5 538 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 PCYT2Q99447 389 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms