RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 LCP1P13796 627 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 GLULP15104 373 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 PSMC3P17980 439 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 TBXAS1P24557 533 aaPredicted RBP12.71□□□□□ -0.37
SCFD1-201ENST00000311943 CLCN1P35523 988 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 AVPR1AP37288 418 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 KIF11P52732 1056 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 CETN1Q12798 172 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 RAPGEF1Q13905 1077 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 SGO2Q562F6 1265 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 ANKRD52Q8NB46 1076 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 LEMD2Q8NC56 503 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 PIWIL1Q96J94 861 aaKnown RBP12.71□□□□□ -0.37
SCFD1-201ENST00000311943 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
SCFD1-201ENST00000311943 TRMT61BQ9BVS5 477 aaKnown RBP12.71□□□□□ -0.37
SCFD1-201ENST00000311943 BRD9Q9H8M2 597 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 NLRC4Q9NPP4 1024 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 TDP1Q9NUW8 608 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 IL37Q9NZH6 218 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.71□□□□□ -0.37
SCFD1-201ENST00000311943 CPQQ9Y646 472 aa12.71□□□□□ -0.37
SCFD1-201ENST00000311943 M0QYV0 167 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 OAS1P00973 400 aaKnown RBP12.71□□□□□ -0.38
SCFD1-201ENST00000311943 IRF1P10914 325 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 EEF1GP26641 437 aaKnown RBP12.71□□□□□ -0.38
SCFD1-201ENST00000311943 TKTL1P51854 596 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 DRAP1Q14919 205 aaPredicted RBP12.71□□□□□ -0.38
SCFD1-201ENST00000311943 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 ARHGAP15Q53QZ3 475 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 C2CD6Q53TS8 623 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 MTSS1LQ765P7 747 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 MFSD6LQ8IWD5 586 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 WDTC1Q8N5D0 677 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 SH3RF2Q8TEC5 729 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 GCNAQ96QF7 691 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 ULBP1Q9BZM6 244 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 GANQ9H2C0 597 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 TRPV4Q9HBA0 871 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 FBRSL1Q9HCM7 1045 aaKnown RBP12.71□□□□□ -0.38
SCFD1-201ENST00000311943 HPS4Q9NQG7 708 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 TRPM5Q9NZQ8 1165 aa12.71□□□□□ -0.38
SCFD1-201ENST00000311943 ZFP37Q9Y6Q3 630 aaPredicted RBP12.71□□□□□ -0.38
SCFD1-201ENST00000311943 COL4A2P08572 1712 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 NUP210Q8TEM1 1887 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-201ENST00000311943 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 STK25O00506 426 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 VDRP11473 427 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 ADIGQ0VDE8 80 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 MESP2Q0VG99 397 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 SYCP1Q15431 976 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 BPIFB1Q8TDL5 484 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 ZNF606Q8WXB4 792 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 SHC3Q92529 594 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 EDEM1Q92611 657 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
SCFD1-201ENST00000311943 MIS12Q9H081 205 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 POLR3BQ9NW08 1133 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-201ENST00000311943 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
SCFD1-201ENST00000311943 CNTN6Q9UQ52 1028 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 SIK3Q9Y2K2 1263 aa12.7□□□□□ -0.38
SCFD1-201ENST00000311943 YJEFN3A6XGL0 299 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 E7ENQ6 273 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 ZDHHC11BP0C7U3 371 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 UCHL3P15374 230 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 CDK11BP21127 795 aaKnown RBP12.69□□□□□ -0.38
SCFD1-201ENST00000311943 POLR2FP61218 127 aaKnown RBP12.69□□□□□ -0.38
SCFD1-201ENST00000311943 FCHO2Q0JRZ9 810 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 TAF3Q5VWG9 929 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 LCLAT1Q6UWP7 414 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 TPRG1Q6ZUI0 275 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 SFTPA1Q8IWL2 248 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 UBALD2Q8IYN6 164 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 SLC35F5Q8WV83 523 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 SLITRK1Q96PX8 696 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 SLC2A4RGQ9NR83 387 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 RBM12Q9NTZ6 932 aaKnown RBP12.69□□□□□ -0.38
SCFD1-201ENST00000311943 USP3Q9Y6I4 520 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 MYOFQ9NZM1 2061 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 PRR33A8MZF0 331 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 LEFTY2O00292 366 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 DPYSL4O14531 572 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 ZNF263O14978 683 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 THAP12O43422 761 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
SCFD1-201ENST00000311943 GNA15P30679 374 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 MFAP3P55082 362 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 TAF5Q15542 800 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 ZNF77Q15935 545 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 RAB41Q5JT25 222 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 SCUBE3Q8IX30 993 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 TBC1D17Q9HA65 648 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 UXTQ9UBK9 157 aaPredicted RBP12.69□□□□□ -0.38
SCFD1-201ENST00000311943 NAGPAQ9UK23 515 aa12.69□□□□□ -0.38
SCFD1-201ENST00000311943 NDRG2Q9UN36 371 aaKnown RBP12.69□□□□□ -0.38
SCFD1-201ENST00000311943 F5P12259 2224 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms