RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 DSG1Q02413 1049 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 MAD2L1Q13257 205 aaPredicted RBP11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 FBXO33Q7Z6M2 555 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 ENGASEQ8NFI3 743 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 CHAMP1Q96JM3 812 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 GJB4Q9NTQ9 266 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 DBR1Q9UK59 544 aaKnown RBP11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 NEURL4Q96JN8 1562 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 PPP1R37O75864 691 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 MYBP10242 640 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 RASA1P20936 1047 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 PRDM16Q9HAZ2 1276 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 KIF1CO43896 1103 aaKnown RBP11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 GSPT2Q8IYD1 628 aaKnown RBP11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 C10orf53Q8N6V4 93 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 RIN3Q8TB24 985 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 STK39Q9UEW8 545 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 ENO3P13929 434 aaPredicted RBP11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 TRPM8Q7Z2W7 1104 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 P3H2Q8IVL5 708 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 CGRRF1Q99675 332 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 EIF3HO15372 352 aaKnown RBP eCLIP11.7□□□□□ -0.543e-6■■■□□ 16.6
VCPIP1-201ENST00000310421 B3GAT3O94766 335 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 TAF2Q6P1X5 1199 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 LINC00116Q8NCU8 138 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 RPS6KL1Q9Y6S9 549 aa11.7□□□□□ -0.54
VCPIP1-201ENST00000310421 MYMKA6NI61 221 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CENPAP49450 140 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CYP4Z2PQ8N1L4 340 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 SERAC1Q96JX3 654 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 NFKBIL1Q9UBC1 381 aaPredicted RBP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 TMEM114B3SHH9 223 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CST8O60676 142 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 DDHD2O94830 711 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 COMTP21964 271 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 PLCL1Q15111 1095 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 IYDQ6PHW0 289 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 BLOC1S5Q8TDH9 187 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 RNF103O00237 685 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 C2CD2LO14523 706 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 VPS4BO75351 444 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 WEE2P0C1S8 567 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CYTH1Q15438 398 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 USP38Q8NB14 1042 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 JMJD4Q9H9V9 463 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 AGPAT3Q9NRZ7 376 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 ANKRD6Q9Y2G4 727 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 RBP3P10745 1247 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 MZF1P28698 734 aaPredicted RBP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 KLC1Q07866 573 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CLYBLQ8N0X4 340 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 MGAT4DA6NG13 374 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 TBC1D12O60347 775 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 NTSR2O95665 410 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 SREBF1P36956 1147 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 ITGA8P53708 1063 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 TGFB2P61812 414 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 PURAQ00577 322 aaKnown RBP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 KLHDC7AQ5VTJ3 777 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 C16orf62Q7Z3J2 963 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CASP10Q92851 521 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 DDX28Q9NUL7 540 aaKnown RBP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 TMEM131LA2VDJ0 1609 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 GNG14A0A1W2PPG7 69 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 TRIM66O15016 1216 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 TEX33O43247 280 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 PPP4CP60510 307 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 Q4G0T1 1027 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CTXN3Q4LDR2 81 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 BTNL9Q6UXG8 535 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 DDX42Q86XP3 938 aaKnown RBP eCLIP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 EXD1Q8NHP7 514 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 RPRD1AQ96P16 312 aaPredicted RBP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 WDR24Q96S15 920 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 ZSWIM1Q9BR11 485 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 GANQ9H2C0 597 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 SATB2Q9UPW6 733 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 URB1O60287 2271 aaKnown RBP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 VDRP11473 427 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 AXLP30530 894 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 BST2Q10589 180 aaKnown RBP11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 GLRA3O75311 464 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 CYP11B2P19099 503 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 MCL1Q07820 350 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 RAD18Q9NS91 495 aa11.69□□□□□ -0.54
VCPIP1-201ENST00000310421 TMEM120BA0PK00 339 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 SERPINB1P30740 379 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 C1DQ13901 141 aaKnown RBP11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 SGO1Q5FBB7 561 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 TXNRD3Q86VQ6 643 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 DIABLOQ9NR28 239 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 STMN3Q9NZ72 180 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 CYB561D2O14569 222 aa11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 NUP62P37198 522 aaPredicted RBP11.68□□□□□ -0.54
VCPIP1-201ENST00000310421 LONRF1Q17RB8 773 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms