RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 STX3Q13277 289 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 TTC39BQ5VTQ0 682 aaPredicted RBP13.55□□□□□ -0.24
TVP23A-201ENST00000299866 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 USP37Q86T82 979 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 DEFB107AQ8IZN7 70 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 ZFP28Q8NHY6 868 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 E7ESA3 106 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 NDC80O14777 642 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
TVP23A-201ENST00000299866 CDK4P11802 303 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 NPTX2P47972 431 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 COPAP53621 1224 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 JAG1P78504 1218 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 MRPS5P82675 430 aaKnown RBP13.55□□□□□ -0.24
TVP23A-201ENST00000299866 CYLC2Q14093 348 aaPredicted RBP13.55□□□□□ -0.24
TVP23A-201ENST00000299866 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
TVP23A-201ENST00000299866 TMEM161BQ8NDZ6 487 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 KMT5AQ9NQR1 393 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 BLOC1S6Q9UL45 172 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 MAD1L1Q9Y6D9 718 aa13.55□□□□□ -0.24
TVP23A-201ENST00000299866 CCDC166P0CW27 439 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 ITGB5P18084 799 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 FDFT1P37268 417 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 TBL3Q12788 808 aaKnown RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 GK3PQ14409 553 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 UGCGQ16739 394 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 MYLK3Q32MK0 819 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 CYP4A22Q5TCH4 519 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 PHF13Q86YI8 300 aaPredicted RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 GMCL1Q96IK5 515 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 UBAP1Q9NZ09 502 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 POMPQ9Y244 141 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 SDR42E2A6NKP2 422 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 ADCY3O60266 1144 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 TRPA1O75762 1119 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 KRT37O76014 449 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 IL1BP01584 269 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 SNRPAP09012 282 aaKnown RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 NCF2P19878 526 aaPredicted RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 QARSP47897 775 aaKnown RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 ZNF394Q53GI3 561 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 NDUFAF2Q8N183 169 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 TEKT1Q969V4 418 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 PRPF18Q99633 342 aaKnown RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 C1orf21Q9H246 121 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 IFT122Q9HBG6 1241 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 KCNH7Q9NS40 1196 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 HOMER2Q9NSB8 354 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 TMOD2Q9NZR1 351 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 DNAJC16Q9Y2G8 782 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 ABCA3Q99758 1704 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 CD48P09326 243 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 PCSK6P29122 969 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 ALDH1A3P47895 512 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 MROH9Q5TGP6 573 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 DUS1LQ6P1R4 473 aaKnown RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 B3GNT9Q6UX72 402 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 TMEM179Q6ZVK1 233 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 ANO5Q75V66 913 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 RFX6Q8HWS3 928 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 GPD1LQ8N335 351 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 XAB2Q9HCS7 855 aaKnown RBP13.54□□□□□ -0.24
TVP23A-201ENST00000299866 CDH22Q9UJ99 828 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 PPME1Q9Y570 386 aa13.54□□□□□ -0.24
TVP23A-201ENST00000299866 SUPT3HO75486 399 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 VIL1P09327 827 aaKnown RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 GTF2H1P32780 548 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 STAT2P52630 851 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 WNT7BP56706 349 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 EIF3EP60228 445 aaKnown RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 DMP1Q13316 513 aaPredicted RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 DPYSL3Q14195 570 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 TBCCQ15814 346 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 TEX44Q53QW1 395 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 TRIM72Q6ZMU5 477 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 MXRA8Q9BRK3 442 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 PCSK1NQ9UHG2 260 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 APOBEC2Q9Y235 224 aaKnown RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 ITM2AO43736 263 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 ACOT2P49753 483 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 SPP2Q13103 211 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 CUL2Q13617 745 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 CNGA3Q16281 694 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 C16orf46Q6P387 395 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 POLNQ7Z5Q5 900 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 MAP4K3Q8IVH8 894 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 WDR75Q8IWA0 830 aaKnown RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 DCUN1D1Q96GG9 259 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 VCPIP1Q96JH7 1222 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 APOBEC3GQ9HC16 384 aaKnown RBP13.53□□□□□ -0.24
TVP23A-201ENST00000299866 SIRPGQ9P1W8 387 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 PI4KBQ9UBF8 816 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 TDRKHQ9Y2W6 561 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms