RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 HSFY1Q96LI6 401 aa28.35■■■□□ 2.13
SSU72-201ENST00000291386 RPP25Q9BUL9 199 aaKnown RBP28.35■■■□□ 2.13
SSU72-201ENST00000291386 NLRC4Q9NPP4 1024 aa28.35■■■□□ 2.13
SSU72-201ENST00000291386 PI4K2BG5E9Z4 385 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 DCXO43602 365 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 OLFM2O95897 454 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 ALADP13716 330 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 SOX5P35711 763 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 AVPR1AP37288 418 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 TUBP50607 506 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 ZNF268Q14587 947 aaPredicted RBP28.34■■■□□ 2.13
SSU72-201ENST00000291386 PM20D1Q6GTS8 502 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 SCML4Q8N228 414 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 STK32AQ8WU08 396 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 SPAG5Q96R06 1193 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 TLR8Q9NR97 1041 aaKnown RBP28.34■■■□□ 2.13
SSU72-201ENST00000291386 GMIPQ9P107 970 aa28.34■■■□□ 2.13
SSU72-201ENST00000291386 CHORDC1Q9UHD1 332 aaPredicted RBP28.34■■■□□ 2.13
SSU72-201ENST00000291386 TRAV19A0A0A6YYK7 116 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 C2orf78A6NCI8 922 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 OAS1P00973 400 aaKnown RBP28.33■■■□□ 2.13
SSU72-201ENST00000291386 CYP11B1P15538 503 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 PBX1P40424 430 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 STAT1P42224 750 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 PMF1Q6P1K2 205 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 UBALD2Q8IYN6 164 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 KXD1Q9BQD3 176 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 LHX5Q9H2C1 402 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 LRRC4Q9HBW1 653 aa28.33■■■□□ 2.13
SSU72-201ENST00000291386 USP17L7P0C7H9 530 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 PSEN1P49768 467 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 TKTL1P51854 596 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 DENND1BQ6P3S1 775 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 ZNF276Q8N554 614 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 RNF214Q8ND24 703 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 DEPDC1BQ8WUY9 529 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 PLA2G2FQ9BZM2 168 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 KIF9Q9HAQ2 790 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 TRPC7Q9HCX4 862 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 MYO6Q9UM54 1294 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 DUSP12Q9UNI6 340 aa28.32■■■□□ 2.12
SSU72-201ENST00000291386 PRAMEF12O95522 483 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 CFHP08603 1231 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 HDCP19113 662 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 VIPR2P41587 438 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 ZXDAP98168 799 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 FIGNQ5HY92 759 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 VITQ6UXI7 678 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 MFSD6LQ8IWD5 586 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 CELF5Q8N6W0 485 aaKnown RBP28.31■■■□□ 2.12
SSU72-201ENST00000291386 ST13P5Q8NFI4 369 aaPredicted RBP28.31■■■□□ 2.12
SSU72-201ENST00000291386 DDX1Q92499 740 aaKnown RBP28.31■■■□□ 2.12
SSU72-201ENST00000291386 SLC22A12Q96S37 553 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 EDEM3Q9BZQ6 932 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 CYLDQ9NQC7 956 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 CNGB3Q9NQW8 809 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 TDP1Q9NUW8 608 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 IFNKQ9P0W0 207 aa28.31■■■□□ 2.12
SSU72-201ENST00000291386 HELZP42694 1942 aaKnown RBP28.31■■■□□ 2.12
SSU72-201ENST00000291386 HEPACAM2A8MVW5 462 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 GABBR2O75899 941 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 ZBED1O96006 694 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 TCF3P15923 654 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 KRT9P35527 623 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 SLC7A9P82251 487 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 HECTD3Q5T447 861 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 CACNA2D4Q7Z3S7 1137 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 ARL14EPQ8N8R7 260 aaPredicted RBP28.3■■■□□ 2.12
SSU72-201ENST00000291386 EPS8L1Q8TE68 723 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 EDAQ92838 391 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 USP13Q92995 863 aaPredicted RBP28.3■■■□□ 2.12
SSU72-201ENST00000291386 RSPRY1Q96DX4 576 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 CYP2S1Q96SQ9 504 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 SLC4A5Q9BY07 1137 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 ULBP1Q9BZM6 244 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 TTYH3Q9C0H2 523 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 SLC2A4RGQ9NR83 387 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 CLIC5Q9NZA1 410 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 ARHGAP26Q9UNA1 814 aa28.3■■■□□ 2.12
SSU72-201ENST00000291386 DLL1O00548 723 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 GFPT2O94808 682 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 ABL1P00519 1130 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 SRFP11831 508 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 PSMC3P17980 439 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 ACADSBP45954 432 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 PGFP49763 221 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 ADIGQ0VDE8 80 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 SCD5Q86SK9 330 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 ZNF677Q86XU0 584 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 ARHGAP18Q8N392 663 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 BAP1Q92560 729 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 NUP58Q9BVL2 599 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 RNF38Q9H0F5 515 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 NMUR1Q9HB89 426 aa28.29■■■□□ 2.12
SSU72-201ENST00000291386 KIF26AQ9ULI4 1882 aaPredicted RBP28.28■■■□□ 2.12
SSU72-201ENST00000291386 DPYSL4O14531 572 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 CKMP06732 381 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 TPM3P06753 285 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 RGS7P49802 495 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 FCHO2Q0JRZ9 810 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms