RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 COBLL1Q53SF7 1204 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
SNF8-201ENST00000290330 SNX30Q5VWJ9 437 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 KRT39Q6A163 491 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 LONP2Q86WA8 852 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 ADGRG2Q8IZP9 1017 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
SNF8-201ENST00000290330 ERCC4Q92889 916 aaPredicted RBP11.09□□□□□ -0.63
SNF8-201ENST00000290330 CD101Q93033 1021 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 EXOC4Q96A65 974 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 TWNKQ96RR1 684 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 TMEM8AQ9HCN3 771 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 FAM49BQ9NUQ9 324 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 OTOGLQ3ZCN5 2332 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 HAX1O00165 279 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 CETN3O15182 167 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 COCHO43405 550 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 CILPO75339 1184 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 NFATC1O95644 943 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 ZDHHC11BP0C7U3 371 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 MBL2P11226 248 aaPredicted RBP11.08□□□□□ -0.64
SNF8-201ENST00000290330 CNR2P34972 360 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 ID4P47928 161 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 TUBP50607 506 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 MAP3K7CLP57077 242 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 SRSF5Q13243 272 aaKnown RBP11.08□□□□□ -0.64
SNF8-201ENST00000290330 FBXO43Q4G163 708 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 HEATR6Q6AI08 1181 aaKnown RBP11.08□□□□□ -0.64
SNF8-201ENST00000290330 FILIP1Q7Z7B0 1213 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 WHAMMQ8TF30 809 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 SEMA4DQ92854 862 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 SECISBP2LQ93073 1101 aaKnown RBP11.08□□□□□ -0.64
SNF8-201ENST00000290330 CYFIP2Q96F07 1278 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 TIGD1Q96MW7 591 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 HNRNPABQ99729 332 aaKnown RBP11.08□□□□□ -0.64
SNF8-201ENST00000290330 NT5C1AQ9BXI3 368 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 NIF3L1Q9GZT8 377 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 GMIPQ9P107 970 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 CFAP97Q9P2B7 532 aa11.08□□□□□ -0.64
SNF8-201ENST00000290330 ZNF638Q14966 1978 aaKnown RBP11.08□□□□□ -0.64
SNF8-201ENST00000290330 SLC9A3R1O14745 358 aaPredicted RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 SCAMP3O14828 347 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 SMC2O95347 1197 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 FAM200BP0CF97 657 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 EPB41P11171 864 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 CD58P19256 250 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 TGM1P22735 817 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 ADORA2BP29275 332 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 OPRD1P41143 372 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 PGFP49763 221 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 FKBP3Q00688 224 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 SIM2Q14190 667 aaPredicted RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 DHCR24Q15392 516 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 LPAL2Q16609 132 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 GAB4Q2WGN9 574 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 ANKRD40Q6AI12 368 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 PRR23BQ6ZRT6 265 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 CLEC20AQ6ZU45 233 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 DDX42Q86XP3 938 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNF8-201ENST00000290330 ZC3H3Q8IXZ2 948 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 SMARCE1Q969G3 411 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 RMDN1Q96DB5 314 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 FAXDC2Q96IV6 333 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 ZFRQ96KR1 1074 aaKnown RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 FBXO44Q9H4M3 255 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 CCSER2Q9H7U1 834 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 POLR3BQ9NW08 1133 aaPredicted RBP11.07□□□□□ -0.64
SNF8-201ENST00000290330 RAB20Q9NX57 234 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 GMEB2Q9UKD1 530 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 RAB23Q9ULC3 237 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 SLC8A2Q9UPR5 921 aa11.07□□□□□ -0.64
SNF8-201ENST00000290330 CCDC163A0A0D9SF12 145 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 E2F8A0AVK6 867 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 HHLA1C9JL84 531 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 STX10O60499 249 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 CYP17A1P05093 508 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 PXNP49023 591 aaPredicted RBP11.06□□□□□ -0.64
SNF8-201ENST00000290330 MXI1P50539 228 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 ZNF394Q53GI3 561 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 LAIR1Q6GTX8 287 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 RHBDF2Q6PJF5 856 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 SYT13Q7L8C5 426 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 GPRIN1Q7Z2K8 1008 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 WDR5BQ86VZ2 330 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 ELOA2Q8IYF1 753 aaPredicted RBP11.06□□□□□ -0.64
SNF8-201ENST00000290330 CAMKK1Q8N5S9 505 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 RPLP0P6Q8NHW5 317 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 TSG101Q99816 390 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 PNPLA8Q9NP80 782 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms