RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 F8VZ95 297 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 M0R296 226 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 HAX1O00165 279 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 TULP2O00295 520 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SCAMP3O14828 347 aaKnown RBP6.88□□□□□ -1.31
CD44-204ENST00000279452 TLR5O60602 858 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 GFPT2O94808 682 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 CAVIN2O95810 425 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 RALAP11233 206 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 ZNF18P17022 549 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 FCARP24071 287 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 KRT9P35527 623 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 IFNAR2P48551 515 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 KPNA1P52294 538 aaPredicted RBP6.88□□□□□ -1.31
CD44-204ENST00000279452 ZNF132P52740 706 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 PFKPQ01813 784 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 ARID5AQ03989 594 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 GOLGA8FQ08AF8 430 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 GOLGA8DPQ0D2H9 430 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 CNGA2Q16280 664 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 TMEM31Q5JXX7 168 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 C10orf120Q5SQS8 335 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 HECTD3Q5T447 861 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 DENND1BQ6P3S1 775 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 LRSAM1Q6UWE0 723 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 LCLAT1Q6UWP7 414 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SLC47A2Q86VL8 602 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SUGP1Q8IWZ8 645 aaKnown RBP6.88□□□□□ -1.31
CD44-204ENST00000279452 ARHGAP18Q8N392 663 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SH3RF2Q8TEC5 729 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 DEPDC1BQ8WUY9 529 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 OVCA2Q8WZ82 227 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SHC3Q92529 594 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 USP13Q92995 863 aaPredicted RBP6.88□□□□□ -1.31
CD44-204ENST00000279452 PBXIP1Q96AQ6 731 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 E2F7Q96AV8 911 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 ZFYVE19Q96K21 471 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 NOX5Q96PH1 765 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SLC22A12Q96S37 553 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 ULBP1Q9BZM6 244 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 MIS12Q9H081 205 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 CCSER2Q9H7U1 834 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 KIF9Q9HAQ2 790 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 PNPLA8Q9NP80 782 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 PLCB1Q9NQ66 1216 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 ARHGEF3Q9NR81 526 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SEPT11Q9NVA2 429 aaKnown RBP6.88□□□□□ -1.31
CD44-204ENST00000279452 COMMD8Q9NX08 183 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 RASAL2Q9UJF2 1139 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 NUDT5Q9UKK9 219 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 CCL26Q9Y258 94 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 SH3BP1Q9Y3L3 701 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 CPQQ9Y646 472 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 COL6A3P12111 3177 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 NCANO14594 1321 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 HHLA1C9JL84 531 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 FOXN3O00409 490 aaPredicted RBP6.87□□□□□ -1.31
CD44-204ENST00000279452 TNFRSF10BO14763 440 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 MDM4O15151 490 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 TEX33O43247 280 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 COCHO43405 550 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 ZBED1O96006 694 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 TPM3P06753 285 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 HMBSP08397 361 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 RARGP13631 454 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 ATP5C1P36542 298 aaKnown RBP6.87□□□□□ -1.31
CD44-204ENST00000279452 STAT1P42224 750 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 PLA2G4AP47712 749 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 KIF11P52732 1056 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 UBASH3AP57075 661 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 BPIFB4P59827 614 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 YWHAGP61981 247 aaKnown RBP eCLIP6.87□□□□□ -1.31
CD44-204ENST00000279452 FANCCQ00597 558 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 MTF1Q14872 753 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 IQCB1Q15051 598 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 ARHGAP29Q52LW3 1261 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 BTBD8Q5XKL5 378 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 TPRG1Q6ZUI0 275 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 TADA2BQ86TJ2 420 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 MIB1Q86YT6 1006 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 MFSD6LQ8IWD5 586 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 C1orf131Q8NDD1 294 aaKnown RBP6.87□□□□□ -1.31
CD44-204ENST00000279452 SPDYE1Q8NFV5 336 aaPredicted RBP6.87□□□□□ -1.31
CD44-204ENST00000279452 IPO4Q8TEX9 1081 aaKnown RBP6.87□□□□□ -1.31
CD44-204ENST00000279452 RNF139Q8WU17 664 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 ZNF606Q8WXB4 792 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 NDRG1Q92597 394 aaKnown RBP6.87□□□□□ -1.31
CD44-204ENST00000279452 EDEM1Q92611 657 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 IRF7Q92985 503 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 FAM149B1Q96BN6 582 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 RSPRY1Q96DX4 576 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 ZSWIM1Q9BR11 485 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 STK33Q9BYT3 514 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 GANQ9H2C0 597 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 HSD3B7Q9H2F3 369 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 HEBP1Q9NRV9 189 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 CFAP97Q9P2B7 532 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 STRIP2Q9ULQ0 834 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 SCML2Q9UQR0 700 aa6.87□□□□□ -1.31
CD44-204ENST00000279452 WNT6Q9Y6F9 365 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms