RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 CPSF3Q9UKF6 684 aaKnown RBP15.17■□□□□ 0.02
CNOT9-201ENST00000273064 LOC102724159A0A0B4J2E5 919 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 CLDN5O00501 218 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 CYB561D2O14569 222 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 TSPAN3O60637 253 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 C4BPAP04003 597 aaKnown RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 KDELR1P24390 212 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 PWP2Q15269 919 aaKnown RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 TMCO4Q5TGY1 634 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 RASGEF1CQ8N431 466 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 MREGQ8N565 214 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 PGM2Q96G03 612 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 ABI2Q9NYB9 513 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 URB1O60287 2271 aaKnown RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 SOWAHBA6NEL2 793 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 SKAP2O75563 359 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 JCHAINP01591 159 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 MYL2P10916 166 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 CYP2F1P24903 491 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 POLE2P56282 527 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 CELF3Q5SZQ8 465 aaKnown RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 ERMARDQ5T6L9 678 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 KCNT2Q6UVM3 1135 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 RGS9BPQ6ZS82 235 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 C3orf20Q8ND61 904 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 BARX2Q9UMQ3 279 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 MROH7Q68CQ1 1323 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 GOLGA8QA0A0J9YX86 632 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 GOLGA8OA6NCC3 632 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 BTNL10A8MVZ5 291 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 GOLGA8NF8WBI6 632 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 MLH1P40692 756 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 MMP14P50281 582 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 OCRLQ01968 901 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 RABGAP1LQ5R372 815 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 UBAP2Q5T6F2 1119 aaKnown RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 TRIM42Q8IWZ5 723 aa15.16■□□□□ 0.02
CNOT9-201ENST00000273064 C20orf96Q9NUD7 363 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-201ENST00000273064 PTPRJQ12913 1337 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 C2orf71A6NGG8 1288 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 LIASO43766 372 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 KCNA4P22459 653 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 TAF6P49848 677 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 MORF4L2Q15014 288 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 FBXO47Q5MNV8 452 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 TMEM63BQ5T3F8 832 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 STAMBPL1Q96FJ0 436 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 GBP5Q96PP8 586 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 OSBPL1AQ9BXW6 950 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 LRRC19Q9H756 370 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNOT9-201ENST00000273064 SENP1Q9P0U3 644 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 PHLPP1O60346 1717 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 NWD2Q9ULI1 1742 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 UBA6A0AVT1 1052 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-201ENST00000273064 MAFO75444 373 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-201ENST00000273064 TPD52P55327 224 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-201ENST00000273064 ART3Q13508 389 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 DEFB106AQ8N104 65 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 CYP4X1Q8N118 509 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 POU5F2Q8N7G0 328 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 E2F7Q96AV8 911 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 CITO14578 2027 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 CNTNAP1P78357 1384 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 FAM155BO75949 473 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 ARIH2O95376 493 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 CPB1P15086 417 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 MMP8P22894 467 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 STIP1P31948 543 aaKnown RBP15.15■□□□□ 0.02
CNOT9-201ENST00000273064 THPOP40225 353 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 CCDC117Q8IWD4 279 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-201ENST00000273064 GPC2Q8N158 579 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 ATP6V1E2Q96A05 226 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 PGLYRP2Q96PD5 576 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 HMGXB4Q9UGU5 601 aa15.15■□□□□ 0.02
CNOT9-201ENST00000273064 USP2O75604 605 aaPredicted RBP15.14■□□□□ 0.01
CNOT9-201ENST00000273064 ENDOD1O94919 500 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 DRD4P21917 467 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 NSUN2Q08J23 767 aaKnown RBP eCLIP15.14■□□□□ 0.01
CNOT9-201ENST00000273064 CUL3Q13618 768 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 USP10Q14694 798 aaKnown RBP15.14■□□□□ 0.01
CNOT9-201ENST00000273064 SLFN11Q7Z7L1 901 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 ART4Q93070 314 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 GAD1Q99259 594 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 PCDH9Q9HC56 1237 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 PACSIN3Q9UKS6 424 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 IRS2Q9Y4H2 1338 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 AIM2O14862 343 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 SMIM24O75264 130 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 ATXN1P54253 815 aaKnown RBP15.14■□□□□ 0.01
CNOT9-201ENST00000273064 PTK6Q13882 451 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 LBX2Q6XYB7 198 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 TRIM67Q6ZTA4 783 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 FAM183BPQ6ZVS7 135 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 KATNAL2Q8IYT4 538 aa15.14■□□□□ 0.01
CNOT9-201ENST00000273064 NXF3Q9H4D5 531 aaKnown RBP15.14■□□□□ 0.01
CNOT9-201ENST00000273064 MINDY3Q9H8M7 445 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms