RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ZNF177Q13360 481 aaPredicted RBP15.98■□□□□ 0.15
TIMP3-201ENST00000266085 PTK6Q13882 451 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 CAPSQ13938 189 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 NT5DC4Q86YG4 428 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 CCNJLQ8IV13 435 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 TRPM5Q9NZQ8 1165 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 HES2Q9Y543 173 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 ASTN1O14525 1302 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 ARHGEF7Q14155 803 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 UGCGQ16739 394 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 LBX2Q6XYB7 198 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 EDEM1Q92611 657 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 GPR63Q9BZJ6 419 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 MROH7Q68CQ1 1323 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 LTN1O94822 1766 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 SLC12A8A0AV02 714 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 TBKBP1A7MCY6 615 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 H0Y626 953 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 ADRB2P07550 413 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 HMOX2P30519 316 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 ALDH18A1P54886 795 aaKnown RBP15.98■□□□□ 0.15
TIMP3-201ENST00000266085 ECM1Q16610 540 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 TLR10Q9BXR5 811 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 RNF103-CHMP3A0A140T963 221 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 MYL2P10916 166 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 TGM2P21980 687 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 AP2B1P63010 937 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 CUL3Q13618 768 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 RBBP7Q16576 425 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 MFN1Q8IWA4 741 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 SLC39A10Q9ULF5 831 aa15.98■□□□□ 0.15
TIMP3-201ENST00000266085 ZNF268Q14587 947 aaPredicted RBP15.97■□□□□ 0.15
TIMP3-201ENST00000266085 NFIL3Q16649 462 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 LRRC43Q8N309 656 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 SLC2A14Q8TDB8 520 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 ACP6Q9NPH0 428 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 ZNF212Q9UDV6 495 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 E2F8A0AVK6 867 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 F5H5T6 163 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 HOXC6P09630 235 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 PGM1P36871 562 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 PTENP60484 403 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 SP3Q02447 781 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 ADIGQ0VDE8 80 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 DEFB115Q30KQ5 88 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 RGS9BPQ6ZS82 235 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 PLPPR4Q7Z2D5 763 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 SCUBE3Q8IX30 993 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 PDGFCQ9NRA1 345 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 CFAP99D6REC4 459 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 FAM107AO95990 144 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 RGS4P49798 205 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 GEMP55040 296 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 HSDL1Q3SXM5 330 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 RABGAP1LQ5R372 815 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 FAM171A1Q5VUB5 890 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 PCDHGB4Q9UN71 923 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 TNFSF13BQ9Y275 285 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 CNTNAP2Q9UHC6 1331 aa15.97■□□□□ 0.15
TIMP3-201ENST00000266085 MBL2P11226 248 aaPredicted RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 AARSP49588 968 aaKnown RBP eCLIP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 PTRHD1Q6GMV3 140 aaKnown RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 SLC26A7Q8TE54 656 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 ERP27Q96DN0 273 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 PPP1R36Q96LQ0 422 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 PGLYRP2Q96PD5 576 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 YWHAZP63104 245 aaKnown RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 HIC1Q14526 733 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 ARHGAP15Q53QZ3 475 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 DENND5BQ6ZUT9 1274 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 FBXO36Q8NEA4 188 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 E2F7Q96AV8 911 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 SEC16BQ96JE7 1060 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 TBCBQ99426 244 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 VAV3Q9UKW4 847 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 AAR2Q9Y312 384 aaKnown RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 STX7O15400 261 aaKnown RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 USP2O75604 605 aaPredicted RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 JCHAINP01591 159 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 GJB1P08034 283 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 GLI1P08151 1106 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 PAEPP09466 180 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 NOGQ13253 232 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 AMIGO3Q86WK7 504 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 PDGFDQ9GZP0 370 aaPredicted RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 CDT1Q9H211 546 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 CASS4Q9NQ75 786 aa15.96■□□□□ 0.15
TIMP3-201ENST00000266085 AVENQ9NQS1 362 aaPredicted RBP15.96■□□□□ 0.15
TIMP3-201ENST00000266085 SDR42E2A6NKP2 422 aa15.96■□□□□ 0.14
TIMP3-201ENST00000266085 PJA2O43164 708 aa15.96■□□□□ 0.14
TIMP3-201ENST00000266085 ENO1P06733 434 aaKnown RBP15.96■□□□□ 0.14
TIMP3-201ENST00000266085 MAP4P27816 1152 aaKnown RBP15.96■□□□□ 0.14
TIMP3-201ENST00000266085 FOXD4Q12950 439 aaPredicted RBP15.96■□□□□ 0.14
TIMP3-201ENST00000266085 TRIML2Q8N7C3 387 aa15.96■□□□□ 0.14
TIMP3-201ENST00000266085 EPS8L1Q8TE68 723 aa15.96■□□□□ 0.14
TIMP3-201ENST00000266085 CDC42EP4Q9H3Q1 356 aaKnown RBP15.96■□□□□ 0.14
TIMP3-201ENST00000266085 FAF1Q9UNN5 650 aaPredicted RBP15.96■□□□□ 0.14
TIMP3-201ENST00000266085 MICAL2O94851 1124 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms