RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 FAXDC2Q96IV6 333 aa9.74□□□□□ -0.85
SSR3-201ENST00000265044 PAIP2Q9BPZ3 127 aaKnown RBP9.74□□□□□ -0.85
SSR3-201ENST00000265044 PAAF1Q9BRP4 392 aa9.74□□□□□ -0.85
SSR3-201ENST00000265044 FAM153AQ9UHL3 310 aa9.74□□□□□ -0.85
SSR3-201ENST00000265044 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.74□□□□□ -0.85
SSR3-201ENST00000265044 PTGESO14684 152 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 ROR1Q01973 937 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 DCAF12L1Q5VU92 463 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 ALS2CLQ60I27 953 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 WDTC1Q8N5D0 677 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 HSFY1Q96LI6 401 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 TSPAN18Q96SJ8 248 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 C10orf88Q9H8K7 445 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 VRTNQ9H8Y1 702 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 NUDT5Q9UKK9 219 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 MAD1L1Q9Y6D9 718 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 PIRO00625 290 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 LRCH4O75427 683 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 SASH3O75995 380 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 OR4Q2P0C623 313 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 CCL5P13501 91 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 TCF4P15884 667 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 PMS2P54278 862 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 DCLRE1AQ6PJP8 1040 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 CEP128Q6ZU80 1094 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 RASGEF1CQ8N431 466 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 ARFGAP2Q8N6H7 521 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 OR2W6PQ8NHA6 318 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 TMEM169Q96HH4 297 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 DUSP16Q9BY84 665 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 CDH9Q9ULB4 789 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 CNTN6Q9UQ52 1028 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 POC1B-GALNT4F8VUJ3 575 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 KCNN4O15554 427 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 HOXA2O43364 376 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 CYP2C18P33260 490 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 PEX5P50542 639 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 ADAM17P78536 824 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 TLE2Q04725 743 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 PPP2R5DQ14738 602 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 CCDC142Q17RM4 750 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 TTC19Q6DKK2 380 aaPredicted RBP9.73□□□□□ -0.85
SSR3-201ENST00000265044 ARHGEF18Q6ZSZ5 1173 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 ZDHHC17Q8IUH5 632 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 FAM71DQ8N9W8 422 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 CLEC4CQ8WTT0 213 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 MYLPFQ96A32 169 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 FAF2Q96CS3 445 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 KCNK16Q96T55 309 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 TSEN34Q9BSV6 310 aaKnown RBP9.73□□□□□ -0.85
SSR3-201ENST00000265044 SAYSD1Q9NPB0 183 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 DNPEPQ9ULA0 475 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 AP4E1Q9UPM8 1137 aa9.73□□□□□ -0.85
SSR3-201ENST00000265044 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 HMBSP08397 361 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 PBX3P40426 434 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 ITGA8P53708 1063 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 AP1B1Q10567 949 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 NNTQ13423 1086 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 CCNG2Q16589 344 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 SH3PXD2AQ5TCZ1 1133 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 FAM35AQ86V20 835 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 CTAGE3PQ8IX95 158 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 MICAL1Q8TDZ2 1067 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 RUBCNQ92622 972 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 KCNN1Q92952 543 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 PCED1BQ96HM7 432 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 DCLK3Q9C098 648 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 STMN4Q9H169 189 aaPredicted RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 UPF3AQ9H1J1 476 aaKnown RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 DMAP1Q9NPF5 467 aaPredicted RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 PPANQ9NQ55 473 aaKnown RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 TBK1Q9UHD2 729 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 HPCAL4Q9UM19 191 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 RBBP6Q7Z6E9 1792 aaKnown RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 PLXNB2O15031 1838 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 PAPSS1O43252 624 aaPredicted RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 IVLP07476 585 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 KDELR1P24390 212 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 NDUFV1P49821 464 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 TPI1P60174 286 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 ADCY1Q08828 1119 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 IKBKEQ14164 716 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 HEATR6Q6AI08 1181 aaKnown RBP9.72□□□□□ -0.85
SSR3-201ENST00000265044 TXNRD3NBQ6F5E7 133 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 ZNF280DQ6N043 979 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 PDIK1LQ8N165 341 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 KLHDC9Q8NEP7 349 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 SLITRK1Q96PX8 696 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 WDCPQ9H6R7 721 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 CYTH4Q9UIA0 394 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 GOLGA8KD6RF30 607 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 H3BRJ5 948 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 MGEA5O60502 916 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 KRT15P19012 456 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 DNAJB2P25686 324 aa9.72□□□□□ -0.85
SSR3-201ENST00000265044 YWHAGP61981 247 aaKnown RBP eCLIP9.72□□□□□ -0.85
SSR3-201ENST00000265044 OGDHQ02218 1023 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms