RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 KCNA2P16389 499 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 ATP5C1P36542 298 aaKnown RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 SMAD1Q15797 465 aaKnown RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 RBBP7Q16576 425 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 DENND5BQ6ZUT9 1274 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 SLC24A5Q71RS6 500 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 BRI3BPQ8WY22 251 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 ELMO2Q96JJ3 720 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 CCDC78A2IDD5 438 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 HEATR9A2RTY3 570 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 ATP5BP06576 529 aaKnown RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 CHRM3P20309 590 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 PRKCZQ05513 592 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 ITGB3BPQ13352 177 aaPredicted RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 ZNF669Q96BR6 464 aaPredicted RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 FAM129AQ9BZQ8 928 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 SPG21Q9NZD8 308 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 PPARGC1AQ9UBK2 798 aaKnown RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 CLCA2Q9UQC9 943 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 LTN1O94822 1766 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 ATRNL1Q5VV63 1379 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 ARHGAP10A1A4S6 786 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 GPR25O00155 361 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 CDH16O75309 829 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 DCTN3O75935 186 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 FSTL1Q12841 308 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 EIF2B5Q13144 721 aaKnown RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 WSCD1Q658N2 575 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 DDX42Q86XP3 938 aaKnown RBP eCLIP14.44□□□□□ -0.1
CDH1-201ENST00000261769 BLOC1S5Q8TDH9 187 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 C18orf25Q96B23 403 aaPredicted RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 WDR24Q96S15 920 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 CASS4Q9NQ75 786 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 ABCC13Q9NSE7 274 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 FBXL5Q9UKA1 691 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 RWDD3Q9Y3V2 267 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 RPTORQ8N122 1335 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 OR6C75A6NL08 312 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 LTFP02788 710 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 ITGALP20701 1170 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CDH8P55286 799 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 ZNF200P98182 395 aaPredicted RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 TUSC3Q13454 348 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 LRRC8DQ7L1W4 858 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 JAMLQ86YT9 394 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 GAS2L1Q99501 681 aaPredicted RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 PKD2L2Q9NZM6 624 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 TRAV19A0A0A6YYK7 116 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 HDAC4P56524 1084 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 STAMBPL1Q96FJ0 436 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CHORDC1Q9UHD1 332 aaPredicted RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 HES2Q9Y543 173 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CFLARO15519 480 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 MICAL2O94851 1124 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CTCFP49711 727 aaPredicted RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 APLP1P51693 650 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CCZ1BP86790 482 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CCZ1P86791 482 aaPredicted RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 SMARCB1Q12824 385 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 PSMD5Q16401 504 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 HECTD3Q5T447 861 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 EMC1Q8N766 993 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 LRRC52Q8N7C0 313 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 EXD1Q8NHP7 514 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 MARCH2Q9P0N8 246 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CPSF2Q9P2I0 782 aaKnown RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 SRRDQ9UH36 339 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 A0A0A6YYK5 440 aaPredicted RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 A0A0G2JND7 137 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 SH3D19Q5HYK7 790 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 SYCP2LQ5T4T6 812 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 NT5DC1Q5TFE4 455 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 MARC1Q5VT66 337 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 RBM43Q6ZSC3 357 aaKnown RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 PDCD7Q8N8D1 485 aaKnown RBP14.43□□□□□ -0.1
CDH1-201ENST00000261769 IL17RAQ96F46 866 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 HSFY1Q96LI6 401 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 TRIM15Q9C019 465 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 ATP13A1Q9HD20 1204 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 NCKAP1Q9Y2A7 1128 aa14.43□□□□□ -0.1
CDH1-201ENST00000261769 CRTAMO95727 393 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 ANO5Q75V66 913 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 SLC9A9Q8IVB4 645 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 IRX2Q9BZI1 471 aaPredicted RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 POPDC2Q9HBU9 364 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 L3MBTL1Q9Y468 752 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 PCDHA2Q9Y5H9 948 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 PLIN4Q96Q06 1357 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 FAM47DPA6NHR8 397 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 SERPINF2P08697 491 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 IL1RL1Q01638 556 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 TAF11Q15544 211 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 C2CD6Q53TS8 623 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 KCNT1Q5JUK3 1230 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 ERMARDQ5T6L9 678 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 E4F1Q66K89 784 aaPredicted RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 ERAP2Q6P179 960 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 DDIASQ8IXT1 998 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms