RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CCDC159P0C7I6 412 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 SHMT1P34896 483 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 GALCP54803 685 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 SLC47A2Q86VL8 602 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 PARGQ86W56 976 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 FEZF2Q8TBJ5 459 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 SLC16A3O15427 465 aaKnown RBP17.52■□□□□ 0.4
SORT1-201ENST00000256637 TPH1P17752 444 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 PTGER2P43116 358 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 PREPLQ4J6C6 727 aaPredicted RBP17.52■□□□□ 0.4
SORT1-201ENST00000256637 COMMD2Q86X83 199 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 GUF1Q8N442 669 aaKnown RBP17.52■□□□□ 0.4
SORT1-201ENST00000256637 CHP1Q99653 195 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 IQGAP1P46940 1657 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 PARD6BQ9BYG5 372 aa17.52■□□□□ 0.4
SORT1-201ENST00000256637 NEDD8-MDP1E9PL57 170 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 ANTXR2P58335 489 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 FMR1Q06787 632 aaKnown RBP eCLIP17.52■□□□□ 0.39
SORT1-201ENST00000256637 INSCQ1MX18 579 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 RASAL3Q86YV0 1011 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 FMR1NBQ8N0W7 255 aaPredicted RBP17.52■□□□□ 0.39
SORT1-201ENST00000256637 RASSF4Q9H2L5 321 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 VTA1Q9NP79 307 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 LNPEPQ9UIQ6 1025 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.39
SORT1-201ENST00000256637 ANGPT2O15123 496 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 GYG2O15488 501 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 HALP42357 657 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 CLK2P49760 499 aaKnown RBP17.52■□□□□ 0.39
SORT1-201ENST00000256637 TRAPPC5Q8IUR0 188 aa17.52■□□□□ 0.39
SORT1-201ENST00000256637 FAM32AQ9Y421 112 aaKnown RBP17.52■□□□□ 0.39
SORT1-201ENST00000256637 LMNAP02545 664 aaKnown RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 UCHL3P15374 230 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 C1orf146Q5VVC0 180 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 TGS1Q96RS0 853 aaKnown RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 BPIFA1Q9NP55 256 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 GPN3Q9UHW5 284 aaPredicted RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 SKIV2L2P42285 1042 aaKnown RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 TUBP50607 506 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 KCNV2Q8TDN2 545 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 H2AFY2Q9P0M6 372 aaPredicted RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 GMCL1P1Q8NEA9 526 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 DNAJC1Q96KC8 554 aaKnown RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 AGPAT3Q9NRZ7 376 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 RPA1P27694 616 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 ATP13A1Q9HD20 1204 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 UTP6Q9NYH9 597 aaKnown RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 WARS2Q9UGM6 360 aaKnown RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 MTA2O94776 668 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 KCNJ1P48048 391 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 UBXN6Q9BZV1 441 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 GNG14A0A1W2PPG7 69 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 RECQL4O94761 1208 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 SLC2A3P11169 496 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 NR1D1P20393 614 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 IQSEC1Q6DN90 963 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 PSRC1Q6PGN9 363 aaPredicted RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 CHPFQ8IZ52 775 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 MRPL9Q9BYD2 267 aaKnown RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 FAF1Q9UNN5 650 aaPredicted RBP17.51■□□□□ 0.39
SORT1-201ENST00000256637 PCDHB2Q9Y5E7 798 aa17.51■□□□□ 0.39
SORT1-201ENST00000256637 ASTN2O75129 1339 aaPredicted RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 NFICP08651 508 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 INHBEP58166 350 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 UAP1L1Q3KQV9 507 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 SERPINA13PQ6UXR4 307 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 METTL16Q86W50 562 aaKnown RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 C4orf33Q8N1A6 199 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 TMEM176AQ96HP8 235 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 ABCG8Q9H221 673 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 C2orf73Q8N5S3 287 aaPredicted RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 RFFLQ8WZ73 363 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 TSPAN17Q96FV3 270 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 PRMT1Q99873 361 aaKnown RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 PKD2L2Q9NZM6 624 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 INHAP05111 366 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 COMTP21964 271 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 CLYBLQ8N0X4 340 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 RNF103-CHMP3A0A140T963 221 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 MIF4GDA9UHW6 222 aaKnown RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 BTBD19C9JJ37 291 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 DDR2Q16832 855 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 APBA2Q99767 749 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 FARP2O94887 1054 aaPredicted RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 ENO3P13929 434 aaPredicted RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 GUCA1AP43080 201 aaPredicted RBP17.5■□□□□ 0.39
SORT1-201ENST00000256637 BCAT1P54687 386 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 PSD3Q9NYI0 1048 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 SHOC2Q9UQ13 582 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
SORT1-201ENST00000256637 KIAA0391O15091 583 aaKnown RBP17.49■□□□□ 0.39
SORT1-201ENST00000256637 E4F1Q66K89 784 aaPredicted RBP17.49■□□□□ 0.39
SORT1-201ENST00000256637 MROH7Q68CQ1 1323 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 CLDN5O00501 218 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 LTFP02788 710 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 VAC14Q08AM6 782 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 C3orf62Q6ZUJ4 267 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 LRRC37BQ96QE4 947 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 CLPBQ9H078 707 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms