RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 PCYT2Q99447 389 aa19.22■□□□□ 0.67
LRP3-201ENST00000253193 FDXACB1Q9BRP7 624 aaPredicted RBP19.22■□□□□ 0.67
LRP3-201ENST00000253193 ELP3Q9H9T3 547 aa19.22■□□□□ 0.67
LRP3-201ENST00000253193 CPSF3Q9UKF6 684 aaKnown RBP19.22■□□□□ 0.67
LRP3-201ENST00000253193 PIGRP01833 764 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 PHKA2P46019 1235 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 BAG6P46379 1132 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 ACVR2BQ13705 512 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 POLNQ7Z5Q5 900 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 TDRPQ86YL5 185 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 SPATC1LQ9H0A9 340 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 E2F8A0AVK6 867 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 RBL1P28749 1068 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 PTPN4P29074 926 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 NDST1P52848 882 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 LTBP1Q14766 1721 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 SCUBE3Q8IX30 993 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 KIAA0319LQ8IZA0 1049 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 CCNYQ8ND76 341 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 SMC1BQ8NDV3 1235 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 FAM161BQ96MY7 647 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 MECRQ9BV79 373 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 CDT1Q9H211 546 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 CYTH4Q9UIA0 394 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 ARHGAP42A6NI28 874 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 GJC2Q5T442 439 aaPredicted RBP19.21■□□□□ 0.67
LRP3-201ENST00000253193 ACOT1Q86TX2 421 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 XYLT1Q86Y38 959 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 RELL1Q8IUW5 271 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 TRPM4Q8TD43 1214 aa19.21■□□□□ 0.67
LRP3-201ENST00000253193 HMGCRP04035 888 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 TMEM62Q0P6H9 643 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 TMEM132DQ14C87 1099 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 ZC3H12AQ5D1E8 599 aaKnown RBP19.2■□□□□ 0.66
LRP3-201ENST00000253193 NME8Q8N427 588 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 REPS2Q8NFH8 660 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 KLRG1Q96E93 195 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 RNPEPL1Q9HAU8 725 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 BTBD7Q9P203 1132 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 TSPAN16Q9UKR8 245 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 QSER1Q2KHR3 1735 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 FAM237BA0A1B0GVD1 139 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 LUC7L3O95232 432 aaKnown RBP19.2■□□□□ 0.66
LRP3-201ENST00000253193 TRUB2O95900 331 aaKnown RBP19.2■□□□□ 0.66
LRP3-201ENST00000253193 HOXC6P09630 235 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 KCNA3P22001 575 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 ALDH18A1P54886 795 aaKnown RBP19.2■□□□□ 0.66
LRP3-201ENST00000253193 PDE1BQ01064 536 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 CLNKQ7Z7G1 428 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 NDUFAF2Q8N183 169 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 DENND1AQ8TEH3 1009 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 NAF1Q96HR8 494 aaKnown RBP19.2■□□□□ 0.66
LRP3-201ENST00000253193 NSL1Q96IY1 281 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 OSBPL1AQ9BXW6 950 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 TM9SF1O15321 606 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 CIB2O75838 187 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 ZNF132P52740 706 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 CHI3L2Q15782 390 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 GOLGA7BQ2TAP0 167 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 C1orf127Q8N9H9 656 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 FAM172AQ8WUF8 416 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 ZBED3Q96IU2 234 aaPredicted RBP19.2■□□□□ 0.66
LRP3-201ENST00000253193 CNPY3Q9BT09 278 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 FAM49AQ9H0Q0 323 aaPredicted RBP19.2■□□□□ 0.66
LRP3-201ENST00000253193 LRMDAQ9H2I8 198 aa19.2■□□□□ 0.66
LRP3-201ENST00000253193 H3BRJ5 948 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 KRT38O76015 456 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SNRPAP09012 282 aaKnown RBP19.19■□□□□ 0.66
LRP3-201ENST00000253193 PDGFRBP09619 1106 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 CALB2P22676 271 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 ADORA2BP29275 332 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SERPINB4P48594 390 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 ENPEPQ07075 957 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SLC45A4Q5BKX6 768 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 IGDCC3Q8IVU1 814 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 NAT8LQ8N9F0 302 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SRPK1Q96SB4 655 aaKnown RBP19.19■□□□□ 0.66
LRP3-201ENST00000253193 ELOVL4Q9GZR5 314 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 PAK5Q9P286 719 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SMNDC1O75940 238 aaKnown RBP eCLIP19.19■□□□□ 0.66
LRP3-201ENST00000253193 SKIV2L2P42285 1042 aaKnown RBP19.19■□□□□ 0.66
LRP3-201ENST00000253193 SESN2P58004 480 aaPredicted RBP19.19■□□□□ 0.66
LRP3-201ENST00000253193 RAB6CQ53S08 254 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 ADGRD1Q6QNK2 874 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 EXOC8Q8IYI6 725 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 ARHGAP24Q8N264 748 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 NETO2Q8NC67 525 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 C10orf82Q8WW14 230 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SERAC1Q96JX3 654 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 RAB6CQ9H0N0 254 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 ADGRA2Q96PE1 1338 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SOWAHBA6NEL2 793 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 B2RBV5 119 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 LCP1P13796 627 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 PGM1P36871 562 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SLC25A11Q02978 314 aaKnown RBP19.19■□□□□ 0.66
LRP3-201ENST00000253193 RCN1Q15293 331 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 SULF1Q8IWU6 871 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 STK32AQ8WU08 396 aa19.19■□□□□ 0.66
LRP3-201ENST00000253193 NT5C1AQ9BXI3 368 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms