RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 FAM83CQ9BQN1 747 aa26.48■■□□□ 1.83
LSM7-201ENST00000252622 FOXQ1Q9C009 403 aa26.48■■□□□ 1.83
LSM7-201ENST00000252622 LTB4R2Q9NPC1 389 aa26.48■■□□□ 1.83
LSM7-201ENST00000252622 CHORDC1Q9UHD1 332 aaPredicted RBP26.48■■□□□ 1.83
LSM7-201ENST00000252622 CNTN6Q9UQ52 1028 aa26.48■■□□□ 1.83
LSM7-201ENST00000252622 MYH10P35580 1976 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 SHISA7A6NL88 538 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 O00370 1275 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 VWA3BQ502W6 1294 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 HSP90AA4PQ58FG1 418 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 MIIPQ5JXC2 388 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 HECTD3Q5T447 861 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 CC2D1AQ6P1N0 951 aaPredicted RBP26.47■■□□□ 1.83
LSM7-201ENST00000252622 C1orf228Q6PIY5 440 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 C11orf57Q6ZUT1 292 aaPredicted RBP26.47■■□□□ 1.83
LSM7-201ENST00000252622 KIAA1958Q8N8K9 716 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 SH3RF2Q8TEC5 729 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 NELL2Q99435 816 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 RNF38Q9H0F5 515 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 NDST4Q9H3R1 872 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 C8orf33Q9H7E9 229 aaPredicted RBP26.47■■□□□ 1.83
LSM7-201ENST00000252622 TLR8Q9NR97 1041 aaKnown RBP26.47■■□□□ 1.83
LSM7-201ENST00000252622 HESX1Q9UBX0 185 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 APEX2Q9UBZ4 518 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 MRPS17Q9Y2R5 130 aaKnown RBP26.47■■□□□ 1.83
LSM7-201ENST00000252622 SIT1Q9Y3P8 196 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 USP3Q9Y6I4 520 aa26.47■■□□□ 1.83
LSM7-201ENST00000252622 HELZP42694 1942 aaKnown RBP26.47■■□□□ 1.83
LSM7-201ENST00000252622 SLC9A1P19634 815 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 PDGFRLQ15198 375 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 STILQ15468 1287 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 TCP11X2Q5H9J9 407 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 SMYD5Q6GMV2 418 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 CCDC186Q7Z3E2 898 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 PIGZQ86VD9 579 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 CCDC105Q8IYK2 499 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 UBE2TQ9NPD8 197 aaPredicted RBP26.46■■□□□ 1.83
LSM7-201ENST00000252622 GKN1Q9NS71 199 aa26.46■■□□□ 1.83
LSM7-201ENST00000252622 RNF225M0QZC1 329 aaPredicted RBP26.45■■□□□ 1.82
LSM7-201ENST00000252622 XPO1O14980 1071 aaKnown RBP26.45■■□□□ 1.82
LSM7-201ENST00000252622 CYP26A1O43174 497 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 PON1P27169 355 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 MFAP3P55082 362 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 BST2Q10589 180 aaKnown RBP26.45■■□□□ 1.82
LSM7-201ENST00000252622 RAB41Q5JT25 222 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 CDKAL1Q5VV42 579 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 LCLAT1Q6UWP7 414 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 TFAP2BQ92481 460 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 GTSE1Q9NYZ3 720 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 CPQQ9Y646 472 aa26.45■■□□□ 1.82
LSM7-201ENST00000252622 LEFTY2O00292 366 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 COCHO43405 550 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 GALR2O43603 387 aaPredicted RBP26.44■■□□□ 1.82
LSM7-201ENST00000252622 SETSIPP0DME0 302 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 MBL2P11226 248 aaPredicted RBP26.44■■□□□ 1.82
LSM7-201ENST00000252622 CD72P21854 359 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 KPNA1P52294 538 aaPredicted RBP26.44■■□□□ 1.82
LSM7-201ENST00000252622 ZXDBP98169 803 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 TNK2Q07912 1038 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 PDE4CQ08493 712 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 UBXN2BQ14CS0 331 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 ITPRIPL2Q3MIP1 535 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 DDX42Q86XP3 938 aaKnown RBP eCLIP26.44■■□□□ 1.82
LSM7-201ENST00000252622 PRSS33Q8NF86 280 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 OSCP1Q8WVF1 389 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 CCSER2Q9H7U1 834 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 CYLDQ9NQC7 956 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 HPS4Q9NQG7 708 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 DLGAP2Q9P1A6 1054 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.44■■□□□ 1.82
LSM7-201ENST00000252622 MYO16Q9Y6X6 1858 aa26.44■■□□□ 1.82
LSM7-201ENST00000252622 MUC6Q6W4X9 2439 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 FAM170BA6NMN3 283 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 TARSP26639 723 aaKnown RBP26.43■■□□□ 1.82
LSM7-201ENST00000252622 PGFP49763 221 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 PSEN1P49768 467 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 TYRO3Q06418 890 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 RUNX3Q13761 415 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 CNGA2Q16280 664 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 PKDCCQ504Y2 493 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 RALGPS2Q86X27 583 aaPredicted RBP26.43■■□□□ 1.82
LSM7-201ENST00000252622 FAM3CQ92520 227 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 ZSWIM1Q9BR11 485 aa26.43■■□□□ 1.82
LSM7-201ENST00000252622 MTF2Q9Y483 593 aaPredicted RBP26.43■■□□□ 1.82
LSM7-201ENST00000252622 SPECC1L-ADORA2AF8WAN1 911 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 TLR5O60602 858 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 DCNP07585 359 aaKnown RBP26.42■■□□□ 1.82
LSM7-201ENST00000252622 KRT5P13647 590 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 CTHP32929 405 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 MAGEA9P43362 315 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 PLA2G4AP47712 749 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 IFNAR2P48551 515 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 MYL5Q02045 173 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 TRIM68Q6AZZ1 485 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 CAVIN1Q6NZI2 390 aaKnown RBP26.42■■□□□ 1.82
LSM7-201ENST00000252622 GJB7Q6PEY0 223 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 ZNF687Q8N1G0 1237 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 DTWD2Q8NBA8 298 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 ZFRQ96KR1 1074 aaKnown RBP26.42■■□□□ 1.82
LSM7-201ENST00000252622 EBF3Q9H4W6 596 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms