RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 TSPAN16Q9UKR8 245 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 PCDHB4Q9Y5E5 795 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 MIA3Q5JRA6 1907 aa14.51□□□□□ -0.09
VEGFA-201ENST00000230480 FOXN3O00409 490 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 CYP26A1O43174 497 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 COCHO43405 550 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 CLSTN1O94985 981 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 PAEPP09466 180 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 VDRP11473 427 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 TCF3P15923 654 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 HDCP19113 662 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 DDX6P26196 483 aaKnown RBP eCLIP14.5□□□□□ -0.092e-7■■□□□ 12.2
VEGFA-201ENST00000230480 EEF1GP26641 437 aaKnown RBP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 ANXA13P27216 316 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 AVPR2P30518 371 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 CLCN1P35523 988 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 SOX9P48436 509 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 RPL34P49207 117 aaKnown RBP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 SLC7A9P82251 487 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 IFRD2Q12894 506 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 USP4Q13107 963 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 CNGA2Q16280 664 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 TAF12Q16514 161 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 EXOC3L4Q17RC7 722 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 GOLGA7BQ2TAP0 167 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 ANO6Q4KMQ2 910 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 NAIF1Q69YI7 327 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 PMF1Q6P1K2 205 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 TXNDC11Q6PKC3 985 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 SASS6Q6UVJ0 657 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 TTC39CQ8N584 583 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 CELF5Q8N6W0 485 aaKnown RBP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 DEPDC1BQ8WUY9 529 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 MRPS31Q92665 395 aaKnown RBP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 JAKMIP2Q96AA8 810 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 FOXQ1Q9C009 403 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 GANQ9H2C0 597 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 SLITRK6Q9H5Y7 841 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 PNPLA8Q9NP80 782 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 ARHGEF3Q9NR81 526 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 COMMD8Q9NX08 183 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 GTSE1Q9NYZ3 720 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 APEX2Q9UBZ4 518 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 ARHGAP26Q9UNA1 814 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.5□□□□□ -0.09
VEGFA-201ENST00000230480 SCML2Q9UQR0 700 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 SIK3Q9Y2K2 1263 aa14.5□□□□□ -0.09
VEGFA-201ENST00000230480 CHADO15335 359 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 RTN3O95197 1032 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-201ENST00000230480 GPD2P43304 727 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 ARHGAP15Q53QZ3 475 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 KLHDC7AQ5VTJ3 777 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 TRIM68Q6AZZ1 485 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 PM20D1Q6GTS8 502 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 BPIFB1Q8TDL5 484 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 OVCA2Q8WZ82 227 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 FBXO32Q969P5 355 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 VPS16Q9H269 839 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 TBC1D17Q9HA65 648 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 TRPC7Q9HCX4 862 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 GKN1Q9NS71 199 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 TRPM5Q9NZQ8 1165 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 NUDT5Q9UKK9 219 aa14.49□□□□□ -0.09
VEGFA-201ENST00000230480 MYO18AQ92614 2054 aaKnown RBP14.49□□□□□ -0.09
VEGFA-201ENST00000230480 ATP8B3O60423 1300 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 A0A1W2PQH9 124 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 ANTXRLA6NF34 631 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 ARSAP15289 507 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 AOC1P19801 751 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 COPB1P53618 953 aaKnown RBP14.48□□□□□ -0.09
VEGFA-201ENST00000230480 MYL5Q02045 173 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 MLF2Q15773 248 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-201ENST00000230480 TPD52L1Q16890 204 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-201ENST00000230480 SGO2Q562F6 1265 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 DENND1BQ6P3S1 775 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 AOPEPQ8N6M6 819 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 PRSS33Q8NF86 280 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 TTC8Q8TAM2 541 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 SH3RF2Q8TEC5 729 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 DNASE1L2Q92874 299 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 E2F7Q96AV8 911 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 BPIFA3Q9BQP9 254 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 FBRSL1Q9HCM7 1045 aaKnown RBP14.48□□□□□ -0.09
VEGFA-201ENST00000230480 CYLDQ9NQC7 956 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 TJP2Q9UDY2 1190 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 DNAJC12Q9UKB3 198 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 KIAA1257Q9ULG3 409 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
VEGFA-201ENST00000230480 TRAV19A0A0A6YYK7 116 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 SYCE3A1L190 88 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 LEFTY2O00292 366 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 SCAMP3O14828 347 aaKnown RBP14.47□□□□□ -0.09
VEGFA-201ENST00000230480 XPO1O14980 1071 aaKnown RBP14.47□□□□□ -0.09
VEGFA-201ENST00000230480 MDM4O15151 490 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 FYNP06241 537 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 USP17L7P0C7H9 530 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 CD19P15391 556 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 PFKLP17858 780 aa14.47□□□□□ -0.09
VEGFA-201ENST00000230480 TARSP26639 723 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms