RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ZNF200P98182 395 aaPredicted RBP14.68□□□□□ -0.06
SF1-201ENST00000227503 BST1Q10588 318 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 DENND5BQ6ZUT9 1274 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 IGDCC3Q8IVU1 814 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 PIP4K2CQ8TBX8 421 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 MMP19Q99542 508 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 KMT5AQ9NQR1 393 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 UBAP1Q9NZ09 502 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 IL1RAPL1Q9NZN1 696 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 MYCLP12524 364 aaPredicted RBP14.68□□□□□ -0.06
SF1-201ENST00000227503 SFNP31947 248 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 CHN2P52757 468 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 SOX10P56693 466 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 COG7P83436 770 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 GCNT1Q02742 428 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 FOLH1Q04609 750 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 TBL3Q12788 808 aaKnown RBP14.68□□□□□ -0.06
SF1-201ENST00000227503 CBX3Q13185 183 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 MPP3Q13368 585 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 DGKZQ13574 1117 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 TLR1Q15399 786 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 UGT2A3Q6UWM9 527 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 TRIM67Q6ZTA4 783 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 FAM83AQ86UY5 434 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 ZFP28Q8NHY6 868 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 SLC13A1Q9BZW2 595 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 AVENQ9NQS1 362 aaPredicted RBP14.68□□□□□ -0.06
SF1-201ENST00000227503 SLC24A2Q9UI40 661 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 MYPNQ86TC9 1320 aa14.68□□□□□ -0.06
SF1-201ENST00000227503 WDR46O15213 610 aaKnown RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 ABCD1P33897 745 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 ETV4P43268 484 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 TMPRSS15P98073 1019 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 PTK7Q13308 1070 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 CCNIQ14094 377 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 MYLK3Q32MK0 819 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.67□□□□□ -0.064e-7■■□□□ 12.4
SF1-201ENST00000227503 MIPOL1Q8TD10 442 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 PRICKLE1Q96MT3 831 aaPredicted RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 MAP3K20Q9NYL2 800 aaKnown RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 TAGLN3Q9UI15 199 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 RAG1P15918 1043 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 PMLP29590 882 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 KRT76Q01546 638 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 NFX1Q12986 1120 aaKnown RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 RABGAP1LQ5R372 815 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 C15orf39Q6ZRI6 1047 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 RIN3Q8TB24 985 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 PDCD2LQ9BRP1 358 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 COL4A5P29400 1685 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 DSG3P32926 999 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 ATXN3P54252 364 aaPredicted RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 RPL7AP62424 266 aaKnown RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 LRRC8BQ6P9F7 803 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 ADGRD1Q6QNK2 874 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 B3GNT6Q6ZMB0 384 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 ENOSF1Q7L5Y1 443 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 PALM2Q8IXS6 379 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 ZNF516Q92618 1163 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 DGCR14Q96DF8 476 aaKnown RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 CNBD2Q96M20 576 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 RMDN3Q96TC7 470 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
SF1-201ENST00000227503 PXMP2Q9NR77 195 aa14.67□□□□□ -0.06
SF1-201ENST00000227503 PROSCO94903 275 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 STBD1O95210 358 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 CLPTM1O96005 669 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 KRT1P04264 644 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 EMP3P54852 163 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 HNRNPDQ14103 355 aaKnown RBP14.66□□□□□ -0.06
SF1-201ENST00000227503 HIC1Q14526 733 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 CHI3L2Q15782 390 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 EFHC1Q5JVL4 640 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 C1orf228Q6PIY5 440 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 TMC7Q7Z402 723 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 HPS6Q86YV9 775 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 RHOT1Q8IXI2 618 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 GPD1LQ8N335 351 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 ALLCQ8N6M5 410 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 PTTG2Q9NZH5 202 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 LZTS1Q9Y250 596 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 INPP5FQ9Y2H2 1132 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 LOC100653049A0A140TA62 436 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 TM9SF1O15321 606 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 KRT34O76011 436 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 NELFEP18615 380 aaKnown RBP14.66□□□□□ -0.06
SF1-201ENST00000227503 MSX2P35548 267 aaPredicted RBP14.66□□□□□ -0.06
SF1-201ENST00000227503 RGS2P41220 211 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 BMPR2Q13873 1038 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 GRM2Q14416 872 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 KBTBD12Q3ZCT8 623 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 TMCO4Q5TGY1 634 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 RSPH3Q86UC2 560 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 MTMR14Q8NCE2 650 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 GAB3Q8WWW8 586 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
SF1-201ENST00000227503 ZC3H11AO75152 810 aaKnown RBP eCLIP14.65□□□□□ -0.065e-9■■■□□ 15
SF1-201ENST00000227503 AVILO75366 819 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms