RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SLC5A3P53794 718 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 DHCR24Q15392 516 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 SKOR2Q2VWA4 1001 aaPredicted RBP15.91■□□□□ 0.14
UPK3A-201ENST00000216211 ZACNQ401N2 412 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 AASDHQ4L235 1098 aaPredicted RBP15.91■□□□□ 0.14
UPK3A-201ENST00000216211 C2orf27AQ580R0 203 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 CEP135Q66GS9 1140 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 ACOT1Q86TX2 421 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 PDZD8Q8NEN9 1154 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 USP33Q8TEY7 942 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 TMEM174Q8WUU8 243 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 SMARCD1Q96GM5 515 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 LOXL4Q96JB6 756 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 TNIP3Q96KP6 325 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 SMOC1Q9H4F8 434 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 HMGXB4Q9UGU5 601 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 USP25Q9UHP3 1055 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 HPSEQ9Y251 543 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 ABCA7Q8IZY2 2146 aa15.91■□□□□ 0.14
UPK3A-201ENST00000216211 SLC9A3R1O14745 358 aaPredicted RBP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 DCLK1O15075 740 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 COCHO43405 550 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 BEST1O76090 585 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 RPN1P04843 607 aaKnown RBP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 CCDC130P13994 396 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 DGKEP52429 567 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 SGSM1Q2NKQ1 1148 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 PLK5Q496M5 336 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 C1orf220Q5T0J3 134 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 SPOPLQ6IQ16 392 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 SV2AQ7L0J3 742 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 C12orf40Q86WS4 652 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 DDX42Q86XP3 938 aaKnown RBP eCLIP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 SFTPA1Q8IWL2 248 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 FUKQ8N0W3 1084 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 KIAA1958Q8N8K9 716 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 ZMIZ2Q8NF64 920 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 CCDC26Q8TAB7 109 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 TMC2Q8TDI7 906 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 OVCA2Q8WZ82 227 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 ZC3H10Q96K80 434 aaKnown RBP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 SMOQ99835 787 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 TPSD1Q9BZJ3 242 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 DUSP15Q9H1R2 295 aaPredicted RBP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 CCSER2Q9H7U1 834 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 DMAP1Q9NPF5 467 aaPredicted RBP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 KRT82Q9NSB4 513 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 GMIPQ9P107 970 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 EBF1Q9UH73 591 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
UPK3A-201ENST00000216211 MYO18AQ92614 2054 aaKnown RBP15.9■□□□□ 0.14
UPK3A-201ENST00000216211 CALUO43852 315 aaPredicted RBP15.89■□□□□ 0.13
UPK3A-201ENST00000216211 FOXD2O60548 495 aaPredicted RBP15.89■□□□□ 0.13
UPK3A-201ENST00000216211 MYL1P05976 194 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 ZNF806P0C7X5 589 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 P4HA1P13674 534 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 PIK3CAP42336 1068 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 SYKP43405 635 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 NDUFA8P51970 172 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 NDST1P52848 882 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 KRT85P78386 507 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 MESP2Q0VG99 397 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 PPM1JQ5JR12 505 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 HECTD3Q5T447 861 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 RHBDF2Q6PJF5 856 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 CCDC33Q8N5R6 958 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 C12orf50Q8NA57 414 aaPredicted RBP15.89■□□□□ 0.13
UPK3A-201ENST00000216211 TSTD1Q8NFU3 115 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 SLC2A14Q8TDB8 520 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 ZFRQ96KR1 1074 aaKnown RBP15.89■□□□□ 0.13
UPK3A-201ENST00000216211 RXFP3Q9NSD7 469 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 FAM49BQ9NUQ9 324 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 IL37Q9NZH6 218 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 INVSQ9Y283 1065 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 FRMD4BQ9Y2L6 1034 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 CEP192Q8TEP8 1941 aa15.89■□□□□ 0.13
UPK3A-201ENST00000216211 E2F8A0AVK6 867 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 HLA-DRAP01903 254 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 IRF1P10914 325 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 ADH5P11766 374 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 MPLP40238 635 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 ASPAP45381 313 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 MAP3K7CLP57077 242 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 KDSRQ06136 332 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 PLA2G2CQ5R387 149 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 SNX30Q5VWJ9 437 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 C12orf29Q8N999 325 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 TAF4BQ92750 862 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 PNKPQ96T60 521 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 LMBRD1Q9NUN5 540 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 TBC1D14Q9P2M4 693 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 MMP17Q9ULZ9 603 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 TRAF3IP3Q9Y228 551 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 SH3BP1Q9Y3L3 701 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 TNRC6BQ9UPQ9 1833 aaKnown RBP15.88■□□□□ 0.13
UPK3A-201ENST00000216211 PLXND1Q9Y4D7 1925 aa15.88■□□□□ 0.13
UPK3A-201ENST00000216211 FAM92AA1XBS5 289 aa15.87■□□□□ 0.13
UPK3A-201ENST00000216211 IKBKBO14920 756 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms