RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 TSC22D3Q99576 134 aa21.13■□□□□ 0.97
RCN1-201ENST00000054950 PPARGC1AQ9UBK2 798 aaKnown RBP21.13■□□□□ 0.97
RCN1-201ENST00000054950 PCDHGC3Q9UN70 934 aa21.13■□□□□ 0.97
RCN1-201ENST00000054950 KRT19P08727 400 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 TMEM132BQ14DG7 1078 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 XRRA1Q6P2D8 792 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 XYLT1Q86Y38 959 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 TWNKQ96RR1 684 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 ZNF518BQ9C0D4 1074 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 C20orf27Q9GZN8 174 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 IQCGQ9H095 443 aaKnown RBP21.12■□□□□ 0.97
RCN1-201ENST00000054950 SMYD2Q9NRG4 433 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 ZNF214Q9UL59 606 aaPredicted RBP21.12■□□□□ 0.97
RCN1-201ENST00000054950 LRCH1Q9Y2L9 728 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 TTLL3Q9Y4R7 772 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 MAFBQ9Y5Q3 323 aaPredicted RBP21.12■□□□□ 0.97
RCN1-201ENST00000054950 NDC80O14777 642 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 CLGNO14967 610 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 MRPS5P82675 430 aaKnown RBP21.12■□□□□ 0.97
RCN1-201ENST00000054950 TAZQ16635 292 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 CDO1Q16878 200 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 SLC25A41Q8N5S1 370 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.12■□□□□ 0.97
RCN1-201ENST00000054950 RBM15BQ8NDT2 890 aaKnown RBP21.12■□□□□ 0.97
RCN1-201ENST00000054950 REPS2Q8NFH8 660 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 DDX50Q9BQ39 737 aaKnown RBP21.12■□□□□ 0.97
RCN1-201ENST00000054950 XYLT2Q9H1B5 865 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 RAB6BQ9NRW1 208 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 USP18Q9UMW8 372 aa21.12■□□□□ 0.97
RCN1-201ENST00000054950 ADCY3O60266 1144 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 C1QAP02745 245 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 TMPRSS15P98073 1019 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 ROR1Q01973 937 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 KCNJ11Q14654 390 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 SGSM1Q2NKQ1 1148 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 FOXB2Q5VYV0 432 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 OR52E8Q6IFG1 317 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 IRGCQ6NXR0 463 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 ZCCHC23Q6ZST2 131 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 PRPF31Q8WWY3 499 aaKnown RBP21.11■□□□□ 0.97
RCN1-201ENST00000054950 PLAC1Q9HBJ0 212 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.11■□□□□ 0.97
RCN1-201ENST00000054950 PARP14Q460N5 1801 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 H7C0C1 242 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 GRAP2O75791 330 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 TGDSO95455 350 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 ATP5OP48047 213 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 CDH6P55285 790 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 YWHAZP63104 245 aaKnown RBP21.11■□□□□ 0.97
RCN1-201ENST00000054950 IRX4P78413 519 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 KRT72Q14CN4 511 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 DUOXA2Q1HG44 320 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 PIWIL1Q96J94 861 aaKnown RBP21.11■□□□□ 0.97
RCN1-201ENST00000054950 PHACTR1Q9C0D0 580 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 SDCBP2Q9H190 292 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 GPATCH2LQ9NWQ4 482 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 EFR3BQ9Y2G0 817 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 C2CD2Q9Y426 696 aa21.11■□□□□ 0.97
RCN1-201ENST00000054950 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 RXRBP28702 533 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 HMGCS2P54868 508 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 CNTN2Q02246 1040 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 LBRQ14739 615 aaKnown RBP21.1■□□□□ 0.97
RCN1-201ENST00000054950 CHI3L2Q15782 390 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 C15orf59Q2T9L4 293 aaPredicted RBP21.1■□□□□ 0.97
RCN1-201ENST00000054950 TMEM192Q8IY95 271 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 CCDC33Q8N5R6 958 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 PCYT2Q99447 389 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 MYOZ2Q9NPC6 264 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 STX18Q9P2W9 335 aaKnown RBP21.1■□□□□ 0.97
RCN1-201ENST00000054950 MEI4A8MW99 385 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 MSCO60682 206 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 USP1O94782 785 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 NPTXRO95502 500 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 TRUB2O95900 331 aaKnown RBP21.1■□□□□ 0.97
RCN1-201ENST00000054950 HOXC6P09630 235 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 UBTFL6P0CB48 400 aaPredicted RBP21.1■□□□□ 0.97
RCN1-201ENST00000054950 KCNA3P22001 575 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 ALDH18A1P54886 795 aaKnown RBP21.1■□□□□ 0.97
RCN1-201ENST00000054950 OCRLQ01968 901 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 PRAMEF18Q5VWM3 479 aa21.1■□□□□ 0.97
RCN1-201ENST00000054950 GJB1P08034 283 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 YWHAEP62258 255 aaKnown RBP21.09■□□□□ 0.97
RCN1-201ENST00000054950 TRNP1Q6NT89 227 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 LRRC71Q8N4P6 559 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 TTLL6Q8N841 843 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 CMASQ8NFW8 434 aaPredicted RBP21.09■□□□□ 0.97
RCN1-201ENST00000054950 TUBB6Q9BUF5 446 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 ASB3Q9Y575 518 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 SMAPO00193 183 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 KCNN4O15554 427 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 SKIP12755 728 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 POLR2BP30876 1174 aaKnown RBP21.09■□□□□ 0.97
RCN1-201ENST00000054950 INHBEP58166 350 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 CXCL9Q07325 125 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 AP1B1Q10567 949 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 UBAP2LQ14157 1087 aaKnown RBP21.09■□□□□ 0.97
RCN1-201ENST00000054950 SLC26A11Q86WA9 606 aa21.09■□□□□ 0.97
RCN1-201ENST00000054950 ZBED3Q96IU2 234 aaPredicted RBP21.09■□□□□ 0.97
RCN1-201ENST00000054950 PANX3Q96QZ0 392 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 396.1 ms