RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 UNCXA6NJT0 531 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 ATP9AO75110 1047 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 PLEKP08567 350 aaPredicted RBP10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 WEE1P30291 646 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 CAPSQ13938 189 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 TAF11Q15544 211 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 C2CD6Q53TS8 623 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 KCNT1Q5JUK3 1230 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 CCNJLQ8IV13 435 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 HELQQ8TDG4 1101 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 ADGRE3Q9BY15 652 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 TRABDQ9H4I3 376 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 CD274Q9NZQ7 290 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 FBXL21Q9UKT6 434 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 A0A0A6YYK5 440 aaPredicted RBP10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 RHOBTB1O94844 696 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 ADH1AP07327 375 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 USP41Q3LFD5 358 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 RBM43Q6ZSC3 357 aaKnown RBP10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 KCNK18Q7Z418 384 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC35C1Q96A29 364 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 GPATCH2LQ9NWQ4 482 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 NALCNQ8IZF0 1738 aa10.74□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC9A3R1O14745 358 aaPredicted RBP10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 TLL1O43897 1013 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 COG1Q8WTW3 980 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 ACO2Q99798 780 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 LTBP3Q9NS15 1303 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 GRIK3Q13003 919 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 EFTUD2Q15029 972 aaKnown RBP eCLIP10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 MAPRE2Q15555 327 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 ERMARDQ5T6L9 678 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 NT5DC1Q5TFE4 455 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 EMC1Q8N766 993 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 EXD1Q8NHP7 514 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC20A1Q8WUM9 679 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 C9orf72Q96LT7 481 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 SMPD4Q9NXE4 827 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 SELPP16109 830 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 BDNFP23560 247 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 MAGEA4P43358 317 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 ITGA8P53708 1063 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 PALB2Q86YC2 1186 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 TMEM161BQ8NDZ6 487 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 ATP6V1G3Q96LB4 118 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 GPR20Q99678 358 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 ERP44Q9BS26 406 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 TASP1Q9H6P5 420 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 RAMP2O60895 175 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 SPAG7O75391 227 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 PTPN1P18031 435 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 ARFIP2P53365 341 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 C3orf62Q6ZUJ4 267 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 ETNPPLQ8TBG4 499 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC26A7Q8TE54 656 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 APBB2Q92870 758 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 TGS1Q96RS0 853 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 YIPF2Q9BWQ6 316 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 SEZ6LQ9BYH1 1024 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 CDT1Q9H211 546 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 RBM12Q9NTZ6 932 aaKnown RBP10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 CDH9Q9ULB4 789 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 C2CD2Q9Y426 696 aa10.73□□□□□ -0.69
NIPAL3-201ENST00000003912 LYPLA2O95372 231 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 CRTAMO95727 393 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ITGALP20701 1170 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SARSP49591 514 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ARHGDIAP52565 204 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 HDAC4P56524 1084 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ST3GAL1Q11201 340 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 COBLL1Q53SF7 1204 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 DCLRE1AQ6PJP8 1040 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 DENND5BQ6ZUT9 1274 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 DSG4Q86SJ6 1040 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 MCOLN2Q8IZK6 566 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 LRRC43Q8N309 656 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 LZTR1Q8N653 840 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SNX31Q8N9S9 440 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ADAMTSL3P82987 1691 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 TTC36A6NLP5 189 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SUPT3HB4E1H0 165 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SUPT3HO75486 399 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 TOMM70O94826 608 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 LUC7L3O95232 432 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 AGTP01019 485 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC8A1P32418 973 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ZNF135P52742 658 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 PMS1P54277 932 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 CDH8P55286 799 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ZNF571Q7Z3V5 609 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 COG4Q9H9E3 785 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ABCC13Q9NSE7 274 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 DDX20Q9UHI6 824 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SEPT4O43236 478 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 CAPN15O75808 1086 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SNRPAP09012 282 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 KCNJ1P48048 391 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms