RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Grk2Q99MK8 689 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 TcimQ9D915 106 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Entpd5Q9WUZ9 427 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Zbtb12Q9Z150 459 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Rps6kb2Q9Z1M4 485 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 TnfP06804 235 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Hspa4lP48722 838 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Atp5bP56480 529 aaKnown RBP14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Znf746Q3U133 652 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Pla2g4dQ50L43 825 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 DstykQ6XUX1 927 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 TdrkhQ80VL1 560 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 DcakdQ8BHC4 231 aaKnown RBP14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Rasal3Q8C2K5 1041 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Tti1Q91V83 1085 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 PnkpQ9JLV6 522 aaKnown RBP14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Atp6v1g2Q9WTT4 118 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Tll2Q9WVM6 1012 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Mapk13Q9Z1B7 366 aa14.34□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Plekhg4A0A1L1SU27 1217 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Itga9B8JK39 1036 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Zfp358E9Q8M1 571 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Nfatc2ipO09130 412 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Tlx1P43345 332 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Slc24a2Q14BI1 711 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 HiraQ61666 1015 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 SnrpaQ62189 287 aaKnown RBP14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Q6GQV0 436 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Mettl25Q6NXH8 597 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Ttc24Q8BYG0 334 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 HpdlQ8K248 371 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Iqsec1Q8R0S2 961 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Dnajc28Q8VCE1 385 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Q9CR55 154 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 PudpQ9D5U5 234 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Erap1Q9EQH2 930 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Trpm5Q9JJH7 1158 aa14.33□□□□□ -0.11
Pcdha1-202ENSMUST00000193839 Zbtb11G5E8B9 1050 aaKnown RBP14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cdh16O88338 830 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ccnd1P25322 295 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 SPINDOCQ05AH6 381 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Q14AM7 275 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Xlr3cQ61806 226 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Enoph1Q8BGB7 257 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rhpn2Q8BWR8 686 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Sept11Q8C1B7 431 aaKnown RBP14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Washc5Q8C2E7 1159 aaKnown RBP14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Onecut3Q8K557 490 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cyp2c50Q91X77 490 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Dpp3Q99KK7 738 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Scgb2b21A0A087WQA9 112 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rap1gapA2ALS5 663 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 UmpsP13439 481 aaKnown RBP14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ccnd3P30282 292 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Sstr3P30935 428 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fbxo39Q5NBU5 443 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Zfp512bQ6PHP4 879 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Q922M7 232 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ddit4Q9D3F7 229 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Igdcc4Q9EQS9 1252 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Bpifb9bA2AJD1 591 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 PtgisO35074 501 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Klc2O88448 599 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Hcn2O88703 863 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Agxt2Q3UEG6 513 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Parp3Q3ULW8 533 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Phf8Q80TJ7 1023 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Bpifb9aQ80XI7 591 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Slc9a9Q8BZ00 644 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ipo11Q8K2V6 975 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Chst7Q9EP78 484 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Arhgef10Q8C033 1345 aa14.33□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tmigd3G3X8R9 209 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cops5O35864 334 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cep295nlQ497N6 533 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tdrd5Q5VCS6 1040 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ntrk3Q6VNS1 825 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ddx55Q6ZPL9 600 aaKnown RBP14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pnma2Q8BHK0 365 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Atpaf2Q91YY4 289 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pde2aQ922S4 916 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ppp2r3cQ9JK24 453 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Scgb2b7D3YYY1 112 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 E2f6O54917 272 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 M6prP24668 278 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ptprn2P80560 1001 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fam172aQ3TNH5 417 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 R3hdm4Q4VBF2 262 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ccnt2Q7TQK0 723 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 4932411N23RikQ8C0S0 470 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Vmn1r214Q8R279 367 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 CarfQ8VHI4 689 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rnf31Q924T7 1066 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 PmpcbQ9CXT8 489 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 MkksQ9JI70 570 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cog8Q9JJA2 640 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Scube2Q9JJS0 997 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Jag1Q9QXX0 1218 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Serpinb3cA2RSF9 386 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Slc12a1P55014 1095 aa14.32□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms