RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Edf1Q9JMG1 148 aaKnown RBP17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 CtsfQ9R013 462 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Zmym2Q9CU65 1376 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 AfmO89020 608 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cct8P42932 548 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Dlg1Q811D0 905 aaKnown RBP17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Eme1Q8BJW7 570 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Mtg1Q8R2R6 326 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Fam167bP17257 162 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 UrosP51163 265 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Slc24a2Q14BI1 711 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Papd5Q68ED3 633 aaKnown RBP17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Xpo1Q6P5F9 1071 aaKnown RBP17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 PrcpQ7TMR0 491 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Nsun6Q7TS68 476 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 EmsyQ8BMB0 1264 aaKnown RBP17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Smyd2Q8R5A0 433 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cdhr5Q8VHF2 831 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Tomm20lQ9D4V6 152 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Slfn2Q9Z0I6 378 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cul9Q80TT8 1865 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Actr2P61161 394 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cct3P80318 545 aaKnown RBP17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Vars2Q3U2A8 1060 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Q8BP99 230 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Prl7b1Q8CGZ9 251 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Pop1Q8K205 1045 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Ska2Q9CR46 120 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rab6bP61294 208 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Klhl42Q8BFQ9 493 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Tmem117Q8BH18 514 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Trim8Q99PJ2 551 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 PpihQ9D868 188 aa17.27■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm10477F6SW83 55 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Pdk4O70571 412 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Serpinb2P12388 415 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 FesP16879 822 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Hk1P17710 974 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Sema4aQ62178 760 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Atg16l2Q6KAU8 623 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Pphln1Q8K2H1 381 aaKnown RBP17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Msi2Q920Q6 346 aaKnown RBP17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Krt81Q9ERE2 481 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Nrf1Q9WU00 503 aa17.27■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Prdm15E9Q8T2 1174 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Ttc16Q8C1F5 767 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Epsti1Q8VDI1 314 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 NagaQ9QWR8 415 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Ap4s1Q9WVL1 144 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Grik3B1AS29 919 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm3371F7CQW8 167 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Xirp1O70373 1129 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Krt35Q497I4 455 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Traf3Q60803 567 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Scn3bQ8BHK2 215 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 FsbpQ8BKE5 299 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 CherpQ8CGZ0 936 aaKnown RBP17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 4931408C20RikE9PWP9 1381 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Atp6v1e1P50518 226 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Pstpip1P97814 415 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Grid2ipQ0QWG9 1203 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Serpina3fQ80X76 445 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Olfr397Q8VEZ6 315 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fam129cD3YZB0 591 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm8879F6R3J9 157 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Scaf8Q6DID3 1268 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 WdpcpQ8C456 722 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 RorbQ8R1B8 470 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Tbrg4Q91YM4 630 aaKnown RBP17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Snx10Q9CWT3 201 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm6685D3YYP3 228 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Trim30bE9PVL6 203 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Cma1P21844 247 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 EregQ61521 162 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Exoc3l1Q8BI71 739 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Trmt2aQ8BNV1 574 aaKnown RBP17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Lig4Q8BTF7 911 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Pex5lQ8C437 567 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 ItchQ8C863 864 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Slc26a4Q9R155 780 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Nr1h3Q9Z0Y9 445 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Bscl2Q9Z2E9 383 aa17.26■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Nfx1B1AY10 1114 aaKnown RBP17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Hspa1bP17879 642 aaKnown RBP17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 PrkacbP68181 351 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm4952Q5FW57 296 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm5431Q5NCB3 844 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Tdpoz2Q717B2 364 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Q80Y73 168 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Plcg1Q62077 1302 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Gm36210A0A1B0GS00 229 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Eif3dO70194 548 aaKnown RBP17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Usp10P52479 792 aaKnown RBP17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fam102aQ78T81 392 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Lrit1Q8K099 624 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Fcho1Q8K285 873 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Polr3eQ9CZT4 710 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Col16a1Q8BLX7 1580 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 Sall1Q9ER74 1322 aa17.25■□□□□ 0.35
Col17a1-201ENSMUST00000026045 H2-M9O19442 342 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms