RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 PAU11P0CE93 120 aa-5.89□□□□□ -3.35
snR53snR53 PAU13P38725 120 aa-5.89□□□□□ -3.35
snR53snR53 PAU10Q03050 120 aa-5.89□□□□□ -3.35
snR53snR53 PAU9Q3E770 120 aa-5.89□□□□□ -3.35
snR53snR53 POP7P38291 140 aa-5.9□□□□□ -3.35
snR53snR53 YMR320WQ04897 101 aa-5.9□□□□□ -3.35
snR53snR53 PAU16P35994 123 aa-5.91□□□□□ -3.36
snR53snR53 YBR032WP38223 100 aa-5.91□□□□□ -3.36
snR53snR53 YBR090CP38253 122 aa-5.91□□□□□ -3.36
snR53snR53 APS2Q00381 147 aa-5.91□□□□□ -3.36
snR53snR53 YCR095W-AQ3E787 52 aa-5.92□□□□□ -3.36
snR53snR53 BPT1P14772 1559 aa-5.95□□□□□ -3.36
snR53snR53 TDA2P40045 126 aa-5.95□□□□□ -3.36
snR53snR53 YBL071CP38185 102 aa-5.96□□□□□ -3.36
snR53snR53 SRB6P32570 121 aa-5.97□□□□□ -3.37
snR53snR53 RTR2Q12378 196 aa-5.98□□□□□ -3.37
snR53snR53 YPR108W-AQ3E7B3 70 aa-5.98□□□□□ -3.37
snR53snR53 YCR085WP25650 117 aa-5.99□□□□□ -3.37
snR53snR53 ATP18P81450 59 aa-5.99□□□□□ -3.37
snR53snR53 PAU4P53427 120 aa-6.01□□□□□ -3.37
snR53snR53 YMR122W-AQ3E842 84 aa-6.03□□□□□ -3.37
snR53snR53 LYS2P07702 1392 aa-6.04□□□□□ -3.38
snR53snR53 SPC24Q04477 213 aa-6.04□□□□□ -3.38
snR53snR53 YNL277W-AQ3E7Z0 62 aa-6.04□□□□□ -3.38
snR53snR53 Q0144Q9ZZW2 109 aa-6.05□□□□□ -3.38
snR53snR53 MOT1P32333 1867 aa-6.06□□□□□ -3.38
snR53snR53 SIP18P50263 79 aa-6.07□□□□□ -3.38
snR53snR53 YHR214C-DP0CX93 97 aa-6.1□□□□□ -3.39
snR53snR53 YLR365WQ7LIF2 110 aa-6.11□□□□□ -3.39
snR53snR53 SFT1P43682 97 aa-6.12□□□□□ -3.39
snR53snR53 YOR1P53049 1477 aa-6.12□□□□□ -3.39
snR53snR53 SAE3P89114 91 aa-6.13□□□□□ -3.39
snR53snR53 TY3B-IQ7LHG5 1498 aaKnown RBP-6.14□□□□□ -3.39
snR53snR53 YAL065CO13511 128 aa-6.15□□□□□ -3.39
snR53snR53 BUD23P25627 275 aaPredicted RBP-6.17□□□□□ -3.4
snR53snR53 CUP1-1P0CX80 61 aa-6.18□□□□□ -3.4
snR53snR53 CUP1-2P0CX81 61 aa-6.18□□□□□ -3.4
snR53snR53 PAU5P43575 122 aa-6.18□□□□□ -3.4
snR53snR53 VPS51P36116 164 aa-6.19□□□□□ -3.4
snR53snR53 SMD2Q06217 110 aaKnown RBP-6.19□□□□□ -3.4
snR53snR53 YOR289WQ12012 251 aaPredicted RBP-6.19□□□□□ -3.4
snR53snR53 RBL2P48606 106 aaKnown RBP-6.2□□□□□ -3.4
snR53snR53 RPS27AP35997 82 aaKnown RBP-6.21□□□□□ -3.4
snR53snR53 BSC4P53841 131 aa-6.22□□□□□ -3.41
snR53snR53 GIM5Q04493 163 aa-6.22□□□□□ -3.41
snR53snR53 VMA21P41806 77 aa-6.23□□□□□ -3.41
snR53snR53 NUM1Q00402 2748 aa-6.25□□□□□ -3.41
snR53snR53 EMC5P40540 141 aa-6.25□□□□□ -3.41
snR53snR53 SPC1P46965 94 aa-6.25□□□□□ -3.41
snR53snR53 MYO2P19524 1574 aaKnown RBP-6.29□□□□□ -3.42
snR53snR53 NHP10Q03435 203 aa-6.29□□□□□ -3.42
snR53snR53 YOL097W-AQ3E7Y9 61 aa-6.3□□□□□ -3.42
snR53snR53 MRP49P32388 137 aa-6.31□□□□□ -3.42
snR53snR53 YDR524C-BQ3E6R4 66 aa-6.32□□□□□ -3.42
snR53snR53 YLL006W-AQ3E814 58 aa-6.32□□□□□ -3.42
snR53snR53 TIM11P81449 96 aaPredicted RBP-6.33□□□□□ -3.42
snR53snR53 KRE5P22023 1365 aa-6.33□□□□□ -3.42
snR53snR53 GIM4P40005 111 aaKnown RBP-6.34□□□□□ -3.42
snR53snR53 RPS20P38701 121 aaKnown RBP-6.36□□□□□ -3.43
snR53snR53 SWC7Q06707 132 aa-6.36□□□□□ -3.43
snR53snR53 YOR343CQ12484 108 aa-6.36□□□□□ -3.43
snR53snR53 GIM3P53900 129 aa-6.38□□□□□ -3.43
snR53snR53 YDR029WQ12111 104 aa-6.4□□□□□ -3.43
snR53snR53 POC4Q12245 148 aaPredicted RBP-6.4□□□□□ -3.43
snR53snR53 YAR029WP39549 74 aa-6.41□□□□□ -3.44
snR53snR53 YDR119W-AQ2V2P9 66 aa-6.41□□□□□ -3.44
snR53snR53 IRC20Q06554 1556 aa-6.42□□□□□ -3.44
snR53snR53 OLI1P61829 76 aa-6.42□□□□□ -3.44
snR53snR53 YOS1Q3E834 85 aa-6.43□□□□□ -3.44
snR53snR53 RPB11P38902 120 aa-6.44□□□□□ -3.44
snR53snR53 COA2Q3E823 68 aa-6.44□□□□□ -3.44
snR53snR53 SPC2Q04969 178 aa-6.47□□□□□ -3.45
snR53snR53 ATG38Q05789 226 aaKnown RBP-6.47□□□□□ -3.45
snR53snR53 SMC4Q12267 1418 aa-6.48□□□□□ -3.45
snR53snR53 YGL258W-AQ3E740 77 aa-6.48□□□□□ -3.45
snR53snR53 YOR072W-BQ3E832 53 aa-6.48□□□□□ -3.45
snR53snR53 XRN1P22147 1528 aaKnown RBP-6.49□□□□□ -3.45
snR53snR53 UBC4P15731 148 aa-6.5□□□□□ -3.45
snR53snR53 NHP2P32495 156 aaPredicted RBP-6.5□□□□□ -3.45
snR53snR53 YDR278CQ05612 105 aa-6.5□□□□□ -3.45
snR53snR53 FPR2P32472 135 aa-6.52□□□□□ -3.45
snR53snR53 LSM2P38203 95 aaKnown RBP-6.52□□□□□ -3.45
snR53snR53 GNA1P43577 159 aaPredicted RBP-6.52□□□□□ -3.45
snR53snR53 TLG1Q03322 224 aa-6.52□□□□□ -3.45
snR53snR53 CMC2Q3E7A4 109 aa-6.52□□□□□ -3.45
snR53snR53 YKL068W-AQ3E826 78 aa-6.55□□□□□ -3.46
snR53snR53 LHP1P33399 275 aaKnown RBP-6.58□□□□□ -3.46
snR53snR53 YHL005CP38752 130 aa-6.58□□□□□ -3.46
snR53snR53 YMR103CQ04436 120 aa-6.58□□□□□ -3.46
snR53snR53 SCP1Q08873 200 aa-6.58□□□□□ -3.46
snR53snR53 YOR394C-AQ8TGJ0 55 aa-6.6□□□□□ -3.47
snR53snR53 TY3B-GQ99315 1547 aa-6.6□□□□□ -3.47
snR53snR53 PAU23Q07987 124 aa-6.62□□□□□ -3.47
snR53snR53 PAU17Q12370 124 aa-6.62□□□□□ -3.47
snR53snR53 UTP10P42945 1769 aaKnown RBP-6.63□□□□□ -3.47
snR53snR53 RSM19P53733 91 aaPredicted RBP-6.65□□□□□ -3.47
snR53snR53 SNU13P39990 126 aaKnown RBP-6.66□□□□□ -3.48
snR53snR53 CSF1Q12150 2958 aa-6.67□□□□□ -3.48
snR53snR53 APC1P53886 1748 aa-6.67□□□□□ -3.48
snR53snR53 NKP2Q06162 153 aa-6.69□□□□□ -3.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms