RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 YBR032WP38223 100 aa-3.54□□□□□ -2.98
snR38snR38 PAU13P38725 120 aa-3.54□□□□□ -2.98
snR38snR38 PAU15P40585 124 aa-3.54□□□□□ -2.98
snR38snR38 PAU10Q03050 120 aa-3.54□□□□□ -2.98
snR38snR38 PAU9Q3E770 120 aa-3.54□□□□□ -2.98
snR38snR38 TOS6P48560 102 aa-3.55□□□□□ -2.98
snR38snR38 CSN9Q03981 162 aa-3.55□□□□□ -2.98
snR38snR38 TDA2P40045 126 aa-3.57□□□□□ -2.98
snR38snR38 YCR085WP25650 117 aa-3.59□□□□□ -2.98
snR38snR38 APS2Q00381 147 aa-3.59□□□□□ -2.98
snR38snR38 YCR095W-AQ3E787 52 aa-3.59□□□□□ -2.98
snR38snR38 ATP18P81450 59 aa-3.61□□□□□ -2.99
snR38snR38 YPR108W-AQ3E7B3 70 aa-3.61□□□□□ -2.99
snR38snR38 YOR376W-AQ3E805 51 aa-3.61□□□□□ -2.99
snR38snR38 Q0144Q9ZZW2 109 aa-3.61□□□□□ -2.99
snR38snR38 MOT1P32333 1867 aa-3.62□□□□□ -2.99
snR38snR38 BPT1P14772 1559 aa-3.62□□□□□ -2.99
snR38snR38 PAU16P35994 123 aa-3.62□□□□□ -2.99
snR38snR38 PAU4P53427 120 aa-3.62□□□□□ -2.99
snR38snR38 SPC24Q04477 213 aa-3.63□□□□□ -2.99
snR38snR38 YMR320WQ04897 101 aa-3.63□□□□□ -2.99
snR38snR38 LYS2P07702 1392 aa-3.63□□□□□ -2.99
snR38snR38 SIP18P50263 79 aa-3.64□□□□□ -2.99
snR38snR38 YHR214C-DP0CX93 97 aa-3.65□□□□□ -2.99
snR38snR38 YBL071CP38185 102 aa-3.65□□□□□ -2.99
snR38snR38 RTR2Q12378 196 aa-3.65□□□□□ -2.99
snR38snR38 YNL277W-AQ3E7Z0 62 aa-3.65□□□□□ -2.99
snR38snR38 VPS51P36116 164 aa-3.66□□□□□ -3
snR38snR38 YMR122W-AQ3E842 84 aa-3.66□□□□□ -3
snR38snR38 SAE3P89114 91 aa-3.68□□□□□ -3
snR38snR38 TY3B-IQ7LHG5 1498 aaKnown RBP-3.68□□□□□ -3
snR38snR38 YOR289WQ12012 251 aaPredicted RBP-3.69□□□□□ -3
snR38snR38 YOR1P53049 1477 aa-3.7□□□□□ -3
snR38snR38 VMA21P41806 77 aa-3.7□□□□□ -3
snR38snR38 YLR365WQ7LIF2 110 aa-3.7□□□□□ -3
snR38snR38 RBL2P48606 106 aaKnown RBP-3.71□□□□□ -3
snR38snR38 YAL065CO13511 128 aa-3.74□□□□□ -3.01
snR38snR38 SFT1P43682 97 aa-3.75□□□□□ -3.01
snR38snR38 SMD2Q06217 110 aaKnown RBP-3.75□□□□□ -3.01
snR38snR38 YOL097W-AQ3E7Y9 61 aa-3.75□□□□□ -3.01
snR38snR38 BSC4P53841 131 aa-3.76□□□□□ -3.01
snR38snR38 COA2Q3E823 68 aa-3.76□□□□□ -3.01
snR38snR38 GIM5Q04493 163 aa-3.77□□□□□ -3.01
snR38snR38 YDR524C-BQ3E6R4 66 aa-3.77□□□□□ -3.01
snR38snR38 MYO2P19524 1574 aaKnown RBP-3.77□□□□□ -3.01
snR38snR38 NUM1Q00402 2748 aa-3.78□□□□□ -3.01
snR38snR38 MRP49P32388 137 aa-3.78□□□□□ -3.01
snR38snR38 SWC7Q06707 132 aa-3.78□□□□□ -3.01
snR38snR38 CUP1-1P0CX80 61 aa-3.79□□□□□ -3.02
snR38snR38 CUP1-2P0CX81 61 aa-3.79□□□□□ -3.02
snR38snR38 BUD23P25627 275 aaPredicted RBP-3.79□□□□□ -3.02
snR38snR38 GIM4P40005 111 aaKnown RBP-3.79□□□□□ -3.02
snR38snR38 EMC5P40540 141 aa-3.79□□□□□ -3.02
snR38snR38 YOR343CQ12484 108 aa-3.8□□□□□ -3.02
snR38snR38 NHP2P32495 156 aaPredicted RBP-3.81□□□□□ -3.02
snR38snR38 PAU5P43575 122 aa-3.81□□□□□ -3.02
snR38snR38 SPC1P46965 94 aa-3.83□□□□□ -3.02
snR38snR38 GIM3P53900 129 aa-3.83□□□□□ -3.02
snR38snR38 OLI1P61829 76 aa-3.83□□□□□ -3.02
snR38snR38 YDR119W-AQ2V2P9 66 aa-3.83□□□□□ -3.02
snR38snR38 RPS27AP35997 82 aaKnown RBP-3.85□□□□□ -3.03
snR38snR38 YKL068W-AQ3E826 78 aa-3.85□□□□□ -3.03
snR38snR38 YOS1Q3E834 85 aa-3.86□□□□□ -3.03
snR38snR38 RPS20P38701 121 aaKnown RBP-3.87□□□□□ -3.03
snR38snR38 NHP10Q03435 203 aa-3.87□□□□□ -3.03
snR38snR38 YLL006W-AQ3E814 58 aa-3.87□□□□□ -3.03
snR38snR38 POC4Q12245 148 aaPredicted RBP-3.88□□□□□ -3.03
snR38snR38 YOR072W-BQ3E832 53 aa-3.88□□□□□ -3.03
snR38snR38 KRE5P22023 1365 aa-3.89□□□□□ -3.03
snR38snR38 RPB11P38902 120 aa-3.89□□□□□ -3.03
snR38snR38 SPC2Q04969 178 aa-3.89□□□□□ -3.03
snR38snR38 YGL258W-AQ3E740 77 aa-3.89□□□□□ -3.03
snR38snR38 LHP1P33399 275 aaKnown RBP-3.9□□□□□ -3.03
snR38snR38 TIM11P81449 96 aaPredicted RBP-3.9□□□□□ -3.03
snR38snR38 ATG38Q05789 226 aaKnown RBP-3.9□□□□□ -3.03
snR38snR38 YDR029WQ12111 104 aa-3.9□□□□□ -3.03
snR38snR38 LSM2P38203 95 aaKnown RBP-3.91□□□□□ -3.04
snR38snR38 IRC20Q06554 1556 aa-3.91□□□□□ -3.04
snR38snR38 SMC4Q12267 1418 aa-3.92□□□□□ -3.04
snR38snR38 CMC2Q3E7A4 109 aa-3.92□□□□□ -3.04
snR38snR38 YAR029WP39549 74 aa-3.94□□□□□ -3.04
snR38snR38 TLG1Q03322 224 aa-3.94□□□□□ -3.04
snR38snR38 FPR2P32472 135 aa-3.95□□□□□ -3.04
snR38snR38 XRN1P22147 1528 aaKnown RBP-3.95□□□□□ -3.04
snR38snR38 YDR278CQ05612 105 aa-3.96□□□□□ -3.04
snR38snR38 APC1P53886 1748 aa-3.97□□□□□ -3.04
snR38snR38 GNA1P43577 159 aaPredicted RBP-3.97□□□□□ -3.04
snR38snR38 UBC4P15731 148 aa-3.98□□□□□ -3.05
snR38snR38 YHL005CP38752 130 aa-3.99□□□□□ -3.05
snR38snR38 SNU13P39990 126 aaKnown RBP-3.99□□□□□ -3.05
snR38snR38 SCP1Q08873 200 aa-3.99□□□□□ -3.05
snR38snR38 NKP2Q06162 153 aa-4□□□□□ -3.05
snR38snR38 TY3B-GQ99315 1547 aa-4.01□□□□□ -3.05
snR38snR38 VPS15P22219 1454 aa-4.04□□□□□ -3.06
snR38snR38 YOR394C-AQ8TGJ0 55 aa-4.04□□□□□ -3.06
snR38snR38 UTP10P42945 1769 aaKnown RBP-4.05□□□□□ -3.06
snR38snR38 PAU23Q07987 124 aa-4.06□□□□□ -3.06
snR38snR38 PAU17Q12370 124 aa-4.06□□□□□ -3.06
snR38snR38 Q0017Q9ZZX8 53 aa-4.06□□□□□ -3.06
snR38snR38 KOG1P38873 1557 aa-4.06□□□□□ -3.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms