RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	YOR343C	Q12484	108 aa		0.78	□□□□□ -2.28
CTR9	YOL145C	TY4B-J	P47024	1803 aa		0.78	□□□□□ -2.28
CTR9	YOL145C	BSC4	P53841	131 aa		0.78	□□□□□ -2.28
CTR9	YOL145C	YDR381C-A	Q3E6R5	114 aa		0.78	□□□□□ -2.28
CTR9	YOL145C	YKL018C-A	Q3E7A7	99 aa		0.78	□□□□□ -2.28
CTR9	YOL145C	SHU1	P38751	150 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	YDR210W	Q03482	75 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	YBR201C-A	Q2V2Q3	67 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	NOP10	Q6Q547	58 aa	Predicted RBP	0.77	□□□□□ -2.29
CTR9	YOL145C	PDR15	Q04182	1529 aa	Known RBP	0.77	□□□□□ -2.29
CTR9	YOL145C	YHR214C-D	P0CX93	97 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	YDR119W-A	Q2V2P9	66 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	YCL048W-A	Q2V2Q2	79 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	GDB1	Q06625	1536 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	POL1	P13382	1468 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	TOM6	P33448	61 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	SSS1	P35179	80 aa		0.77	□□□□□ -2.29
CTR9	YOL145C	YER188C-A	P0C0V2	99 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	YFR010W-A	P0C5N0	62 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	Q0032	Q9ZZX7	96 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	SRB8	P25648	1427 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	HUA1	P40325	198 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	SWM2	P40342	146 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	AIM19	P40502	157 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	YNL122C	P53921	115 aa	Predicted RBP	0.76	□□□□□ -2.29
CTR9	YOL145C	MGR2	Q02889	113 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	YOL131W	Q08270	108 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	TY1B-PR2	P0C2J0	1756 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	YPK9	Q12697	1472 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	AUA1	P32450	94 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	YNL190W	P53872	204 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	SGF11	Q03067	99 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	YOR034C-A	Q3E735	80 aa		0.76	□□□□□ -2.29
CTR9	YOL145C	YAL065C	O13511	128 aa		0.75	□□□□□ -2.29
CTR9	YOL145C	CCW14	O13547	238 aa		0.75	□□□□□ -2.29
CTR9	YOL145C	YJR107C-A	P0CT86	78 aa		0.75	□□□□□ -2.29
CTR9	YOL145C	RPS11A	P0CX47	156 aa	Known RBP	0.75	□□□□□ -2.29
CTR9	YOL145C	RPS11B	P0CX48	156 aa	Known RBP	0.75	□□□□□ -2.29
CTR9	YOL145C	YOR032W-A	Q8TGS1	66 aa		0.75	□□□□□ -2.29
CTR9	YOL145C	MLP1	Q02455	1875 aa	Known RBP	0.75	□□□□□ -2.29
CTR9	YOL145C	RPA190	P10964	1664 aa	Known RBP	0.75	□□□□□ -2.29
CTR9	YOL145C	YJR128W	P47162	119 aa		0.75	□□□□□ -2.29
CTR9	YOL145C	COX12	Q01519	83 aa		0.75	□□□□□ -2.29
CTR9	YOL145C	YMR007W	Q03675	126 aa		0.75	□□□□□ -2.29
CTR9	YOL145C	ESC1	Q03661	1658 aa	Known RBP	0.74	□□□□□ -2.29
CTR9	YOL145C	RPC10	P40422	70 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	YAR064W	P39563	99 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	YIL086C	P40503	102 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	YJL009W	P47078	108 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	COX19	Q3E731	98 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	YMR122W-A	Q3E842	84 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	TOM1	Q03280	3268 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	YDL022C-A	P0C5L6	82 aa		0.74	□□□□□ -2.29
CTR9	YOL145C	YNL042W-B	Q3E7Z2	85 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	YIL134C-A	Q45U18	67 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	STT4	P37297	1900 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	YRF1-1	P0CX20	1796 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	YRF1-5	P0CX21	1796 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	YRF1-8	P0CX22	1796 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	QCR9	P22289	66 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	YOR314W	Q12506	109 aa		0.73	□□□□□ -2.29
CTR9	YOL145C	YMR141C	P40211	102 aa		0.72	□□□□□ -2.29
CTR9	YOL145C	ERI1	P62651	68 aa	Known RBP	0.72	□□□□□ -2.29
CTR9	YOL145C	YNL198C	P40166	100 aa		0.72	□□□□□ -2.29
CTR9	YOL145C	ATP18	P81450	59 aa		0.72	□□□□□ -2.29
CTR9	YOL145C	IRA1	P18963	3092 aa		0.71	□□□□□ -2.3
CTR9	YOL145C	NUP159	P40477	1460 aa		0.71	□□□□□ -2.3
CTR9	YOL145C	RPL37A	P49166	88 aa	Known RBP	0.71	□□□□□ -2.3
CTR9	YOL145C	YOR072W	Q08486	104 aa		0.71	□□□□□ -2.3
CTR9	YOL145C	YGR121W-A	Q3E816	71 aa		0.71	□□□□□ -2.3
CTR9	YOL145C	YFL041W-A	Q3E817	63 aa		0.71	□□□□□ -2.3
CTR9	YOL145C	YIL102C	P40488	101 aa		0.71	□□□□□ -2.3
CTR9	YOL145C	YHR213W-B	Q8TGK1	99 aa		0.71	□□□□□ -2.3
CTR9	YOL145C	TY1B-BR	Q12193	1756 aa		0.7	□□□□□ -2.3
CTR9	YOL145C	YLR146W-A	Q2V2P1	62 aa		0.7	□□□□□ -2.3
CTR9	YOL145C	PAU7	P39545	55 aa		0.7	□□□□□ -2.3
CTR9	YOL145C	YKL065W-A	Q2V2P2	73 aa		0.7	□□□□□ -2.3
CTR9	YOL145C	SDH6	Q3E785	79 aa		0.7	□□□□□ -2.3
CTR9	YOL145C	YOL164W-A	Q3E7A5	60 aa		0.7	□□□□□ -2.3
CTR9	YOL145C	UFD4	P33202	1483 aa		0.7	□□□□□ -2.3
CTR9	YOL145C	URB1	P34241	1764 aa	Known RBP	0.7	□□□□□ -2.3
CTR9	YOL145C	YRF1-2	P40105	1681 aa		0.69	□□□□□ -2.3
CTR9	YOL145C	YGR035W-A	Q45U48	73 aa		0.69	□□□□□ -2.3
CTR9	YOL145C	FAS2	P19097	1887 aa	Known RBP	0.69	□□□□□ -2.3
CTR9	YOL145C	MMS22	Q06164	1454 aa		0.69	□□□□□ -2.3
CTR9	YOL145C	IRA2	P19158	3079 aa		0.69	□□□□□ -2.3
CTR9	YOL145C	ECM29	P38737	1868 aa		0.69	□□□□□ -2.3
CTR9	YOL145C	YPR108W-A	Q3E7B3	70 aa		0.69	□□□□□ -2.3
CTR9	YOL145C	RPL43A	P0CX25	92 aa	Known RBP	0.68	□□□□□ -2.3
CTR9	YOL145C	RPL43B	P0CX26	92 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	YSY6	P38374	65 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	EDC1	P53080	175 aa	Predicted RBP	0.68	□□□□□ -2.3
CTR9	YOL145C	YIL102C-A	Q2V2P5	75 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	NTE1	Q04958	1679 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	YOR192C-C	Q3E736	78 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	COX7	P10174	60 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	VMA9	Q3E7B6	73 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	YLR307C-A	Q3E825	87 aa		0.68	□□□□□ -2.3
CTR9	YOL145C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.68	□□□□□ -2.3
CTR9	YOL145C	MOT1	P32333	1867 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 128.1 ms