RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C TY4B-HP0C2J7 1802 aa1.7□□□□□ -2.14
PEX12YMR026C XRN1P22147 1528 aaKnown RBP1.7□□□□□ -2.14
PEX12YMR026C TY1B-NL2Q99337 1749 aaKnown RBP1.69□□□□□ -2.14
PEX12YMR026C RPL43AP0CX25 92 aaKnown RBP1.69□□□□□ -2.14
PEX12YMR026C RPL43BP0CX26 92 aa1.69□□□□□ -2.14
PEX12YMR026C PAU4P53427 120 aa1.69□□□□□ -2.14
PEX12YMR026C BSC4P53841 131 aa1.69□□□□□ -2.14
PEX12YMR026C YOR343CQ12484 108 aa1.69□□□□□ -2.14
PEX12YMR026C TY1B-BRQ12193 1756 aa1.69□□□□□ -2.14
PEX12YMR026C DNF3Q12674 1656 aa1.68□□□□□ -2.14
PEX12YMR026C RPL37BP51402 88 aaKnown RBP1.68□□□□□ -2.14
PEX12YMR026C YER188C-AP0C0V2 99 aa1.67□□□□□ -2.14
PEX12YMR026C MMS22Q06164 1454 aa1.66□□□□□ -2.14
PEX12YMR026C YHR214C-DP0CX93 97 aa1.64□□□□□ -2.15
PEX12YMR026C AUA1P32450 94 aa1.64□□□□□ -2.15
PEX12YMR026C TOM6P33448 61 aa1.64□□□□□ -2.15
PEX12YMR026C MLP1Q02455 1875 aaKnown RBP1.64□□□□□ -2.15
PEX12YMR026C YBR072C-AQ3E794 53 aa1.63□□□□□ -2.15
PEX12YMR026C YHR173CP38864 112 aa1.6□□□□□ -2.15
PEX12YMR026C YDR010CQ12426 110 aa1.6□□□□□ -2.15
PEX12YMR026C YNL042W-BQ3E7Z2 85 aa1.6□□□□□ -2.15
PEX12YMR026C TY1B-BLQ12490 1755 aa1.59□□□□□ -2.15
PEX12YMR026C YLR157W-EP0CF00 54 aa1.59□□□□□ -2.15
PEX12YMR026C YPR145C-AQ2V2P0 78 aa1.59□□□□□ -2.15
PEX12YMR026C YDR381C-AQ3E6R5 114 aa1.59□□□□□ -2.15
PEX12YMR026C YLR307C-AQ3E825 87 aa1.59□□□□□ -2.15
PEX12YMR026C ECM29P38737 1868 aa1.58□□□□□ -2.16
PEX12YMR026C RIM15P43565 1770 aa1.58□□□□□ -2.16
PEX12YMR026C NUP159P40477 1460 aa1.57□□□□□ -2.16
PEX12YMR026C PAU23Q07987 124 aa1.56□□□□□ -2.16
PEX12YMR026C PAU17Q12370 124 aa1.56□□□□□ -2.16
PEX12YMR026C YOR314WQ12506 109 aa1.56□□□□□ -2.16
PEX12YMR026C YKL065W-AQ2V2P2 73 aa1.56□□□□□ -2.16
PEX12YMR026C YDR119W-AQ2V2P9 66 aa1.56□□□□□ -2.16
PEX12YMR026C YMR122W-AQ3E842 84 aa1.56□□□□□ -2.16
PEX12YMR026C TY1B-DR6P0C2I3 1755 aa1.56□□□□□ -2.16
PEX12YMR026C TY1B-LR2P0C2I5 1755 aa1.56□□□□□ -2.16
PEX12YMR026C TY1B-PR3P0C2J1 1755 aaKnown RBP1.56□□□□□ -2.16
PEX12YMR026C UTP10P42945 1769 aaKnown RBP1.56□□□□□ -2.16
PEX12YMR026C TY1B-JR2P47100 1755 aaKnown RBP1.56□□□□□ -2.16
PEX12YMR026C TY1B-MR1Q04214 1755 aa1.56□□□□□ -2.16
PEX12YMR026C TY1B-MR2Q04670 1755 aaKnown RBP1.56□□□□□ -2.16
PEX12YMR026C TY1B-NL1Q12112 1755 aa1.56□□□□□ -2.16
PEX12YMR026C TY1B-GR1Q12141 1755 aa1.56□□□□□ -2.16
PEX12YMR026C TY1B-GR3Q12316 1755 aa1.56□□□□□ -2.16
PEX12YMR026C TY1B-PLQ12414 1755 aaKnown RBP1.56□□□□□ -2.16
PEX12YMR026C TY1B-ORQ92393 1755 aa1.56□□□□□ -2.16
PEX12YMR026C MOT1P32333 1867 aa1.55□□□□□ -2.16
PEX12YMR026C FPR2P32472 135 aa1.55□□□□□ -2.16
PEX12YMR026C PDX3P38075 228 aaKnown RBP1.55□□□□□ -2.16
PEX12YMR026C NOP10Q6Q547 58 aaPredicted RBP1.55□□□□□ -2.16
PEX12YMR026C YHR213W-AQ8TGT4 77 aa1.55□□□□□ -2.16
PEX12YMR026C Q0032Q9ZZX7 96 aa1.55□□□□□ -2.16
PEX12YMR026C DOP1Q03921 1698 aa1.55□□□□□ -2.16
PEX12YMR026C YAL065CO13511 128 aa1.54□□□□□ -2.16
PEX12YMR026C YBR201C-AQ2V2Q3 67 aa1.54□□□□□ -2.16
PEX12YMR026C TY1B-LR3P0C2I6 1755 aaKnown RBP1.54□□□□□ -2.16
PEX12YMR026C YIL156W-BQ2V2P4 73 aa1.53□□□□□ -2.16
PEX12YMR026C SIN3P22579 1536 aa1.52□□□□□ -2.17
PEX12YMR026C COX7P10174 60 aa1.52□□□□□ -2.17
PEX12YMR026C YOR105WQ08504 108 aa1.51□□□□□ -2.17
PEX12YMR026C SWM2P40342 146 aa1.5□□□□□ -2.17
PEX12YMR026C YGR121W-AQ3E816 71 aa1.5□□□□□ -2.17
PEX12YMR026C FAS2P19097 1887 aaKnown RBP1.5□□□□□ -2.17
PEX12YMR026C TY1B-DR5P0C2I2 1755 aa1.48□□□□□ -2.17
PEX12YMR026C TY1B-PR1P0C2I9 1755 aaKnown RBP1.48□□□□□ -2.17
PEX12YMR026C TY1B-ER2Q03619 1755 aa1.48□□□□□ -2.17
PEX12YMR026C TY1B-DR1Q03855 1755 aa1.48□□□□□ -2.17
PEX12YMR026C TY1B-ML1Q04711 1755 aaKnown RBP1.48□□□□□ -2.17
PEX12YMR026C TY1B-LR1Q12088 1755 aaKnown RBP1.48□□□□□ -2.17
PEX12YMR026C TY1B-GR2Q12269 1755 aa1.48□□□□□ -2.17
PEX12YMR026C TY2B-CP25384 1770 aa1.47□□□□□ -2.17
PEX12YMR026C TY2B-DR1Q12472 1770 aa1.47□□□□□ -2.17
PEX12YMR026C TY1B-DR3Q99231 1755 aa1.47□□□□□ -2.17
PEX12YMR026C LSM2P38203 95 aaKnown RBP1.47□□□□□ -2.17
PEX12YMR026C RPC10P40422 70 aa1.47□□□□□ -2.17
PEX12YMR026C STT4P37297 1900 aa1.46□□□□□ -2.18
PEX12YMR026C RPL38P49167 78 aaKnown RBP1.46□□□□□ -2.18
PEX12YMR026C YNL190WP53872 204 aa1.46□□□□□ -2.18
PEX12YMR026C ATP18P81450 59 aa1.46□□□□□ -2.18
PEX12YMR026C TY1B-JR1P47098 1755 aa1.44□□□□□ -2.18
PEX12YMR026C TY1B-ML2Q03434 1755 aaKnown RBP1.44□□□□□ -2.18
PEX12YMR026C TY1B-ER1Q03612 1755 aa1.44□□□□□ -2.18
PEX12YMR026C TY1B-OLQ12273 1755 aa1.44□□□□□ -2.18
PEX12YMR026C QCR9P22289 66 aa1.44□□□□□ -2.18
PEX12YMR026C YDL022C-AP0C5L6 82 aa1.43□□□□□ -2.18
PEX12YMR026C TCB3Q03640 1545 aaKnown RBP1.42□□□□□ -2.18
PEX12YMR026C YGR035W-AQ45U48 73 aa1.42□□□□□ -2.18
PEX12YMR026C PRP8P33334 2413 aaKnown RBP1.41□□□□□ -2.18
PEX12YMR026C UFD4P33202 1483 aa1.41□□□□□ -2.18
PEX12YMR026C SNF2P22082 1703 aa1.4□□□□□ -2.18
PEX12YMR026C PAI3P01094 68 aa1.4□□□□□ -2.19
PEX12YMR026C YNL198CP40166 100 aa1.4□□□□□ -2.19
PEX12YMR026C YOL164W-AQ3E7A5 60 aa1.4□□□□□ -2.19
PEX12YMR026C YOL097W-AQ3E7Y9 61 aa1.4□□□□□ -2.19
PEX12YMR026C PMD1P32634 1753 aa1.39□□□□□ -2.19
PEX12YMR026C BLM10P43583 2143 aa1.39□□□□□ -2.19
PEX12YMR026C SCC2Q04002 1493 aa1.39□□□□□ -2.19
PEX12YMR026C TIM12P32830 109 aa1.38□□□□□ -2.19
PEX12YMR026C SGF11Q03067 99 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms