RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C BSC4P53841 131 aa1.7□□□□□ -2.14
VPS71YML041C BLM10P43583 2143 aa1.7□□□□□ -2.14
VPS71YML041C PDX3P38075 228 aaKnown RBP1.68□□□□□ -2.14
VPS71YML041C AUA1P32450 94 aa1.67□□□□□ -2.14
VPS71YML041C POL1P13382 1468 aa1.67□□□□□ -2.14
VPS71YML041C YMR175W-AQ3E766 64 aa1.64□□□□□ -2.15
VPS71YML041C YSP2Q06681 1438 aa1.63□□□□□ -2.15
VPS71YML041C RIM15P43565 1770 aa1.62□□□□□ -2.15
VPS71YML041C YRF1-2P40105 1681 aa1.62□□□□□ -2.15
VPS71YML041C CWP2P43497 92 aa1.62□□□□□ -2.15
VPS71YML041C YOR343CQ12484 108 aa1.62□□□□□ -2.15
VPS71YML041C YNL042W-BQ3E7Z2 85 aa1.62□□□□□ -2.15
VPS71YML041C TY1B-BLQ12490 1755 aa1.62□□□□□ -2.15
VPS71YML041C MLP1Q02455 1875 aaKnown RBP1.6□□□□□ -2.15
VPS71YML041C YCR085WP25650 117 aa1.59□□□□□ -2.15
VPS71YML041C RPA12P32529 125 aaKnown RBP1.59□□□□□ -2.15
VPS71YML041C YKL068W-AQ3E826 78 aa1.59□□□□□ -2.15
VPS71YML041C FAS2P19097 1887 aaKnown RBP1.58□□□□□ -2.16
VPS71YML041C YHR214C-DP0CX93 97 aa1.58□□□□□ -2.16
VPS71YML041C FPR2P32472 135 aa1.58□□□□□ -2.16
VPS71YML041C MOT1P32333 1867 aa1.58□□□□□ -2.16
VPS71YML041C ECM29P38737 1868 aa1.58□□□□□ -2.16
VPS71YML041C TY1B-BRQ12193 1756 aa1.57□□□□□ -2.16
VPS71YML041C COX7P10174 60 aa1.57□□□□□ -2.16
VPS71YML041C RPL38P49167 78 aaKnown RBP1.57□□□□□ -2.16
VPS71YML041C Q0032Q9ZZX7 96 aa1.57□□□□□ -2.16
VPS71YML041C YOL164W-AQ3E7A5 60 aa1.56□□□□□ -2.16
VPS71YML041C PRP8P33334 2413 aaKnown RBP1.56□□□□□ -2.16
VPS71YML041C TOM6P33448 61 aa1.55□□□□□ -2.16
VPS71YML041C PAU23Q07987 124 aa1.55□□□□□ -2.16
VPS71YML041C PAU17Q12370 124 aa1.55□□□□□ -2.16
VPS71YML041C YBR201C-AQ2V2Q3 67 aa1.55□□□□□ -2.16
VPS71YML041C YAL065CO13511 128 aa1.53□□□□□ -2.16
VPS71YML041C ESP1Q03018 1630 aa1.53□□□□□ -2.16
VPS71YML041C YOR105WQ08504 108 aa1.53□□□□□ -2.16
VPS71YML041C DNF3Q12674 1656 aa1.53□□□□□ -2.16
VPS71YML041C RPC10P40422 70 aa1.52□□□□□ -2.17
VPS71YML041C POC4Q12245 148 aaPredicted RBP1.52□□□□□ -2.17
VPS71YML041C YKL065W-AQ2V2P2 73 aa1.52□□□□□ -2.17
VPS71YML041C YMR122W-AQ3E842 84 aa1.51□□□□□ -2.17
VPS71YML041C YNL198CP40166 100 aa1.5□□□□□ -2.17
VPS71YML041C ATP18P81450 59 aa1.49□□□□□ -2.17
VPS71YML041C MMS22Q06164 1454 aa1.49□□□□□ -2.17
VPS71YML041C YJR107C-AP0CT86 78 aa1.48□□□□□ -2.17
VPS71YML041C YOR314WQ12506 109 aa1.48□□□□□ -2.17
VPS71YML041C NOP10Q6Q547 58 aaPredicted RBP1.48□□□□□ -2.17
VPS71YML041C TY1B-DR6P0C2I3 1755 aa1.48□□□□□ -2.17
VPS71YML041C TY1B-LR2P0C2I5 1755 aa1.48□□□□□ -2.17
VPS71YML041C TY1B-PR3P0C2J1 1755 aaKnown RBP1.48□□□□□ -2.17
VPS71YML041C TY1B-JR2P47100 1755 aaKnown RBP1.48□□□□□ -2.17
VPS71YML041C TY1B-MR1Q04214 1755 aa1.48□□□□□ -2.17
VPS71YML041C TY1B-MR2Q04670 1755 aaKnown RBP1.48□□□□□ -2.17
VPS71YML041C TY1B-NL1Q12112 1755 aa1.48□□□□□ -2.17
VPS71YML041C TY1B-GR1Q12141 1755 aa1.48□□□□□ -2.17
VPS71YML041C TY1B-GR3Q12316 1755 aa1.48□□□□□ -2.17
VPS71YML041C TY1B-PLQ12414 1755 aaKnown RBP1.48□□□□□ -2.17
VPS71YML041C TY1B-ORQ92393 1755 aa1.48□□□□□ -2.17
VPS71YML041C TY1B-PR2P0C2J0 1756 aa1.47□□□□□ -2.17
VPS71YML041C STT4P37297 1900 aa1.47□□□□□ -2.17
VPS71YML041C YNL190WP53872 204 aa1.47□□□□□ -2.17
VPS71YML041C YDR381C-AQ3E6R5 114 aa1.47□□□□□ -2.17
VPS71YML041C SNF2P22082 1703 aa1.46□□□□□ -2.18
VPS71YML041C YPR145C-AQ2V2P0 78 aa1.46□□□□□ -2.18
VPS71YML041C TY1B-LR3P0C2I6 1755 aaKnown RBP1.45□□□□□ -2.18
VPS71YML041C UTP10P42945 1769 aaKnown RBP1.45□□□□□ -2.18
VPS71YML041C RPS29BP41058 56 aaKnown RBP1.45□□□□□ -2.18
VPS71YML041C SDH6Q3E785 79 aa1.44□□□□□ -2.18
VPS71YML041C YOL097W-AQ3E7Y9 61 aa1.43□□□□□ -2.18
VPS71YML041C YIL156W-BQ2V2P4 73 aa1.42□□□□□ -2.18
VPS71YML041C SWM2P40342 146 aa1.4□□□□□ -2.19
VPS71YML041C SGF11Q03067 99 aa1.4□□□□□ -2.19
VPS71YML041C ATX1P38636 73 aa1.38□□□□□ -2.19
VPS71YML041C YHR213W-AQ8TGT4 77 aa1.38□□□□□ -2.19
VPS71YML041C XRN1P22147 1528 aaKnown RBP1.38□□□□□ -2.19
VPS71YML041C QCR9P22289 66 aa1.36□□□□□ -2.19
VPS71YML041C LSM2P38203 95 aaKnown RBP1.36□□□□□ -2.19
VPS71YML041C YPR108W-AQ3E7B3 70 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-DR5P0C2I2 1755 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-PR1P0C2I9 1755 aaKnown RBP1.36□□□□□ -2.19
VPS71YML041C TY1B-JR1P47098 1755 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-ML2Q03434 1755 aaKnown RBP1.36□□□□□ -2.19
VPS71YML041C TY1B-ER1Q03612 1755 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-ER2Q03619 1755 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-DR1Q03855 1755 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-ML1Q04711 1755 aaKnown RBP1.36□□□□□ -2.19
VPS71YML041C TY1B-LR1Q12088 1755 aaKnown RBP1.36□□□□□ -2.19
VPS71YML041C TY1B-GR2Q12269 1755 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-OLQ12273 1755 aa1.36□□□□□ -2.19
VPS71YML041C TY1B-DR3Q99231 1755 aa1.36□□□□□ -2.19
VPS71YML041C BPH1P25356 2167 aa1.35□□□□□ -2.19
VPS71YML041C HKR1P41809 1802 aa1.34□□□□□ -2.19
VPS71YML041C YBR032WP38223 100 aa1.34□□□□□ -2.19
VPS71YML041C YDR119W-AQ2V2P9 66 aa1.34□□□□□ -2.19
VPS71YML041C TY1B-NL2Q99337 1749 aaKnown RBP1.33□□□□□ -2.2
VPS71YML041C YFR009W-AP0C5M9 85 aa1.32□□□□□ -2.2
VPS71YML041C YIL134C-AQ45U18 67 aa1.32□□□□□ -2.2
VPS71YML041C YGR121W-AQ3E816 71 aa1.31□□□□□ -2.2
VPS71YML041C SIN3P22579 1536 aa1.3□□□□□ -2.2
VPS71YML041C TY2B-CP25384 1770 aa1.3□□□□□ -2.2
VPS71YML041C TY2B-DR1Q12472 1770 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms