RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W Q0032Q9ZZX7 96 aa-0.13□□□□□ -2.43
SMD2YLR275W RRT15Q3E811 62 aa-0.14□□□□□ -2.43
SMD2YLR275W SNU13P39990 126 aaKnown RBP-0.16□□□□□ -2.44
SMD2YLR275W TY1B-BRQ12193 1756 aa-0.17□□□□□ -2.44
SMD2YLR275W DNF3Q12674 1656 aa-0.17□□□□□ -2.44
SMD2YLR275W YBR201C-AQ2V2Q3 67 aa-0.17□□□□□ -2.44
SMD2YLR275W RSF2P46974 1380 aa-0.18□□□□□ -2.44
SMD2YLR275W BSC4P53841 131 aa-0.19□□□□□ -2.44
SMD2YLR275W TOM6P33448 61 aa-0.2□□□□□ -2.44
SMD2YLR275W FYV7Q12247 151 aa-0.2□□□□□ -2.44
SMD2YLR275W MSL1P40567 111 aaPredicted RBP-0.21□□□□□ -2.44
SMD2YLR275W RPA190P10964 1664 aaKnown RBP-0.23□□□□□ -2.45
SMD2YLR275W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.23□□□□□ -2.45
SMD2YLR275W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.23□□□□□ -2.45
SMD2YLR275W YDR029WQ12111 104 aa-0.23□□□□□ -2.45
SMD2YLR275W YMR122W-AQ3E842 84 aa-0.24□□□□□ -2.45
SMD2YLR275W SUS1Q6WNK7 96 aa-0.25□□□□□ -2.45
SMD2YLR275W YHR214C-DP0CX93 97 aa-0.26□□□□□ -2.45
SMD2YLR275W YDR042CQ03205 200 aa-0.26□□□□□ -2.45
SMD2YLR275W YDR381C-AQ3E6R5 114 aa-0.26□□□□□ -2.45
SMD2YLR275W YAL065CO13511 128 aa-0.27□□□□□ -2.45
SMD2YLR275W SDH6Q3E785 79 aa-0.27□□□□□ -2.45
SMD2YLR275W YCR108CQ3E819 63 aa-0.27□□□□□ -2.45
SMD2YLR275W MHF2Q3E829 80 aa-0.27□□□□□ -2.45
SMD2YLR275W HKR1P41809 1802 aa-0.27□□□□□ -2.45
SMD2YLR275W TY1B-PR2P0C2J0 1756 aa-0.27□□□□□ -2.45
SMD2YLR275W POL1P13382 1468 aa-0.28□□□□□ -2.45
SMD2YLR275W YGR025WP53216 100 aa-0.28□□□□□ -2.45
SMD2YLR275W ATP18P81450 59 aa-0.28□□□□□ -2.45
SMD2YLR275W NHP2P32495 156 aaPredicted RBP-0.29□□□□□ -2.46
SMD2YLR275W TY1B-DR6P0C2I3 1755 aa-0.32□□□□□ -2.46
SMD2YLR275W TY1B-LR2P0C2I5 1755 aa-0.32□□□□□ -2.46
SMD2YLR275W TY1B-JR2P47100 1755 aaKnown RBP-0.32□□□□□ -2.46
SMD2YLR275W TY1B-MR1Q04214 1755 aa-0.32□□□□□ -2.46
SMD2YLR275W TY1B-MR2Q04670 1755 aaKnown RBP-0.32□□□□□ -2.46
SMD2YLR275W TY1B-NL1Q12112 1755 aa-0.32□□□□□ -2.46
SMD2YLR275W TY1B-GR1Q12141 1755 aa-0.32□□□□□ -2.46
SMD2YLR275W TY1B-GR3Q12316 1755 aa-0.32□□□□□ -2.46
SMD2YLR275W TY1B-PLQ12414 1755 aaKnown RBP-0.32□□□□□ -2.46
SMD2YLR275W TY1B-ORQ92393 1755 aa-0.32□□□□□ -2.46
SMD2YLR275W GDB1Q06625 1536 aa-0.32□□□□□ -2.46
SMD2YLR275W ZEO1Q08245 113 aa-0.32□□□□□ -2.46
SMD2YLR275W FPR2P32472 135 aa-0.33□□□□□ -2.46
SMD2YLR275W EDC1P53080 175 aaPredicted RBP-0.35□□□□□ -2.47
SMD2YLR275W SCP1Q08873 200 aa-0.35□□□□□ -2.47
SMD2YLR275W PAU23Q07987 124 aa-0.36□□□□□ -2.47
SMD2YLR275W PAU17Q12370 124 aa-0.36□□□□□ -2.47
SMD2YLR275W YCR085WP25650 117 aa-0.37□□□□□ -2.47
SMD2YLR275W YKL068W-AQ3E826 78 aa-0.37□□□□□ -2.47
SMD2YLR275W YDR246W-AQ3E763 66 aa-0.38□□□□□ -2.47
SMD2YLR275W YPR108W-AQ3E7B3 70 aa-0.38□□□□□ -2.47
SMD2YLR275W PDR10P51533 1564 aa-0.38□□□□□ -2.47
SMD2YLR275W SWR1Q05471 1514 aa-0.38□□□□□ -2.47
SMD2YLR275W BPH1P25356 2167 aa-0.39□□□□□ -2.47
SMD2YLR275W ECM29P38737 1868 aa-0.39□□□□□ -2.47
SMD2YLR275W YBR032WP38223 100 aa-0.39□□□□□ -2.47
SMD2YLR275W STT4P37297 1900 aa-0.4□□□□□ -2.47
SMD2YLR275W YPL225WQ08971 146 aaKnown RBP-0.4□□□□□ -2.47
SMD2YLR275W SEN1Q00416 2231 aaKnown RBP-0.4□□□□□ -2.47
SMD2YLR275W ECM12O13529 151 aa-0.41□□□□□ -2.48
SMD2YLR275W YBL044WP38194 122 aa-0.41□□□□□ -2.48
SMD2YLR275W YOL097W-AQ3E7Y9 61 aa-0.41□□□□□ -2.48
SMD2YLR275W YCL001W-BQ96VH2 84 aa-0.42□□□□□ -2.48
SMD2YLR275W MOT1P32333 1867 aa-0.42□□□□□ -2.48
SMD2YLR275W PMD1P32634 1753 aa-0.42□□□□□ -2.48
SMD2YLR275W YMR082CQ04276 118 aa-0.43□□□□□ -2.48
SMD2YLR275W NOP10Q6Q547 58 aaPredicted RBP-0.43□□□□□ -2.48
SMD2YLR275W UTP20P35194 2493 aaKnown RBP-0.44□□□□□ -2.48
SMD2YLR275W TY1B-DR5P0C2I2 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.44□□□□□ -2.48
SMD2YLR275W TY1B-JR1P47098 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W TY1B-ML2Q03434 1755 aaKnown RBP-0.44□□□□□ -2.48
SMD2YLR275W TY1B-ER1Q03612 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W TY1B-ER2Q03619 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W TY1B-DR1Q03855 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W TY1B-ML1Q04711 1755 aaKnown RBP-0.44□□□□□ -2.48
SMD2YLR275W TY1B-LR1Q12088 1755 aaKnown RBP-0.44□□□□□ -2.48
SMD2YLR275W TY1B-GR2Q12269 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W TY1B-OLQ12273 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W TY1B-DR3Q99231 1755 aa-0.44□□□□□ -2.48
SMD2YLR275W YCR075W-AQ3E830 75 aa-0.45□□□□□ -2.48
SMD2YLR275W XRN1P22147 1528 aaKnown RBP-0.46□□□□□ -2.48
SMD2YLR275W YOR343CQ12484 108 aa-0.46□□□□□ -2.48
SMD2YLR275W YMR175W-AQ3E766 64 aa-0.46□□□□□ -2.48
SMD2YLR275W MMS1Q06211 1407 aa-0.47□□□□□ -2.48
SMD2YLR275W YIL156W-BQ2V2P4 73 aa-0.49□□□□□ -2.49
SMD2YLR275W UTP10P42945 1769 aaKnown RBP-0.52□□□□□ -2.49
SMD2YLR275W RPS29AP41057 56 aaKnown RBP-0.53□□□□□ -2.49
SMD2YLR275W YOR105WQ08504 108 aa-0.54□□□□□ -2.5
SMD2YLR275W YKL065W-AQ2V2P2 73 aa-0.59□□□□□ -2.5
SMD2YLR275W YMR001C-AQ8TGS9 76 aa-0.61□□□□□ -2.51
SMD2YLR275W YDL022C-AP0C5L6 82 aa-0.62□□□□□ -2.51
SMD2YLR275W YGL194C-AQ2V2P6 80 aa-0.62□□□□□ -2.51
SMD2YLR275W POC4Q12245 148 aaPredicted RBP-0.63□□□□□ -2.51
SMD2YLR275W YOR314WQ12506 109 aa-0.63□□□□□ -2.51
SMD2YLR275W LTE1P07866 1435 aa-0.64□□□□□ -2.51
SMD2YLR275W YSP2Q06681 1438 aa-0.64□□□□□ -2.51
SMD2YLR275W TY2B-LR1P0C2J3 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W TY2B-FP0CX63 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W TY2B-GR2P0CX64 1770 aa-0.65□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms