RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C NTE1Q04958 1679 aa0.89□□□□□ -2.27
NYV1YLR093C RPA12P32529 125 aaKnown RBP0.89□□□□□ -2.27
NYV1YLR093C BSC4P53841 131 aa0.89□□□□□ -2.27
NYV1YLR093C LTE1P07866 1435 aa0.89□□□□□ -2.27
NYV1YLR093C RPC10P40422 70 aa0.88□□□□□ -2.27
NYV1YLR093C POL2P21951 2222 aaKnown RBP0.87□□□□□ -2.27
NYV1YLR093C PAU23Q07987 124 aa0.87□□□□□ -2.27
NYV1YLR093C PAU17Q12370 124 aa0.87□□□□□ -2.27
NYV1YLR093C YMR175W-AQ3E766 64 aa0.87□□□□□ -2.27
NYV1YLR093C YNL042W-BQ3E7Z2 85 aa0.87□□□□□ -2.27
NYV1YLR093C Q0032Q9ZZX7 96 aa0.87□□□□□ -2.27
NYV1YLR093C YSP2Q06681 1438 aa0.87□□□□□ -2.27
NYV1YLR093C FPR2P32472 135 aa0.86□□□□□ -2.27
NYV1YLR093C YBR201C-AQ2V2Q3 67 aa0.86□□□□□ -2.27
NYV1YLR093C SNF2P22082 1703 aa0.86□□□□□ -2.27
NYV1YLR093C ESC1Q03661 1658 aaKnown RBP0.84□□□□□ -2.28
NYV1YLR093C YHR214C-DP0CX93 97 aa0.83□□□□□ -2.28
NYV1YLR093C YNL190WP53872 204 aa0.83□□□□□ -2.28
NYV1YLR093C POC4Q12245 148 aaPredicted RBP0.83□□□□□ -2.28
NYV1YLR093C YJR107C-AP0CT86 78 aa0.82□□□□□ -2.28
NYV1YLR093C YCR085WP25650 117 aa0.82□□□□□ -2.28
NYV1YLR093C YOR343CQ12484 108 aa0.82□□□□□ -2.28
NYV1YLR093C YPR145C-AQ2V2P0 78 aa0.82□□□□□ -2.28
NYV1YLR093C YMR122W-AQ3E842 84 aa0.82□□□□□ -2.28
NYV1YLR093C YAL065CO13511 128 aa0.81□□□□□ -2.28
NYV1YLR093C PDX3P38075 228 aaKnown RBP0.81□□□□□ -2.28
NYV1YLR093C RPL38P49167 78 aaKnown RBP0.81□□□□□ -2.28
NYV1YLR093C YKL068W-AQ3E826 78 aa0.81□□□□□ -2.28
NYV1YLR093C COX7P10174 60 aa0.8□□□□□ -2.28
NYV1YLR093C YNL198CP40166 100 aa0.8□□□□□ -2.28
NYV1YLR093C YOR105WQ08504 108 aa0.8□□□□□ -2.28
NYV1YLR093C NOP10Q6Q547 58 aaPredicted RBP0.8□□□□□ -2.28
NYV1YLR093C YRF1-2P40105 1681 aa0.79□□□□□ -2.28
NYV1YLR093C TOM6P33448 61 aa0.79□□□□□ -2.28
NYV1YLR093C PRP8P33334 2413 aaKnown RBP0.79□□□□□ -2.28
NYV1YLR093C TY1B-BLQ12490 1755 aa0.78□□□□□ -2.28
NYV1YLR093C ATP18P81450 59 aa0.78□□□□□ -2.28
NYV1YLR093C YIL156W-BQ2V2P4 73 aa0.78□□□□□ -2.28
NYV1YLR093C RIM15P43565 1770 aa0.78□□□□□ -2.29
NYV1YLR093C BLM10P43583 2143 aa0.77□□□□□ -2.29
NYV1YLR093C DNF3Q12674 1656 aa0.75□□□□□ -2.29
NYV1YLR093C RPS29BP41058 56 aaKnown RBP0.75□□□□□ -2.29
NYV1YLR093C YDR381C-AQ3E6R5 114 aa0.75□□□□□ -2.29
NYV1YLR093C SDH6Q3E785 79 aa0.75□□□□□ -2.29
NYV1YLR093C SGF11Q03067 99 aa0.74□□□□□ -2.29
NYV1YLR093C YOR314WQ12506 109 aa0.73□□□□□ -2.29
NYV1YLR093C YIL134C-AQ45U18 67 aa0.73□□□□□ -2.29
NYV1YLR093C FAS2P19097 1887 aaKnown RBP0.73□□□□□ -2.29
NYV1YLR093C ECM29P38737 1868 aa0.73□□□□□ -2.29
NYV1YLR093C YFR009W-AP0C5M9 85 aa0.72□□□□□ -2.29
NYV1YLR093C YKL065W-AQ2V2P2 73 aa0.72□□□□□ -2.29
NYV1YLR093C TY1B-BRQ12193 1756 aa0.71□□□□□ -2.3
NYV1YLR093C LSM2P38203 95 aaKnown RBP0.71□□□□□ -2.3
NYV1YLR093C YPR108W-AQ3E7B3 70 aa0.71□□□□□ -2.3
NYV1YLR093C MMS22Q06164 1454 aa0.71□□□□□ -2.3
NYV1YLR093C YDL022C-AP0C5L6 82 aa0.69□□□□□ -2.3
NYV1YLR093C YBR016WP38216 128 aa0.69□□□□□ -2.3
NYV1YLR093C SWM2P40342 146 aa0.69□□□□□ -2.3
NYV1YLR093C UTP10P42945 1769 aaKnown RBP0.68□□□□□ -2.3
NYV1YLR093C QCR9P22289 66 aa0.68□□□□□ -2.3
NYV1YLR093C MLP1Q02455 1875 aaKnown RBP0.68□□□□□ -2.3
NYV1YLR093C YDR119W-AQ2V2P9 66 aa0.68□□□□□ -2.3
NYV1YLR093C YGR121W-AQ3E816 71 aa0.68□□□□□ -2.3
NYV1YLR093C XRN1P22147 1528 aaKnown RBP0.68□□□□□ -2.3
NYV1YLR093C SIN3P22579 1536 aa0.68□□□□□ -2.3
NYV1YLR093C TIM12P32830 109 aa0.67□□□□□ -2.3
NYV1YLR093C YOL097W-AQ3E7Y9 61 aa0.67□□□□□ -2.3
NYV1YLR093C YHR213W-AQ8TGT4 77 aa0.67□□□□□ -2.3
NYV1YLR093C STT4P37297 1900 aa0.66□□□□□ -2.3
NYV1YLR093C YBR032WP38223 100 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-DR5P0C2I2 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-DR6P0C2I3 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-LR2P0C2I5 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-PR1P0C2I9 1755 aaKnown RBP0.65□□□□□ -2.31
NYV1YLR093C TY1B-PR2P0C2J0 1756 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-PR3P0C2J1 1755 aaKnown RBP0.65□□□□□ -2.31
NYV1YLR093C TY1B-JR2P47100 1755 aaKnown RBP0.65□□□□□ -2.31
NYV1YLR093C TY1B-ER2Q03619 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-DR1Q03855 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-MR1Q04214 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-MR2Q04670 1755 aaKnown RBP0.65□□□□□ -2.31
NYV1YLR093C TY1B-ML1Q04711 1755 aaKnown RBP0.65□□□□□ -2.31
NYV1YLR093C TY1B-LR1Q12088 1755 aaKnown RBP0.65□□□□□ -2.31
NYV1YLR093C TY1B-NL1Q12112 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-GR1Q12141 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-GR2Q12269 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-GR3Q12316 1755 aa0.65□□□□□ -2.31
NYV1YLR093C TY1B-PLQ12414 1755 aaKnown RBP0.65□□□□□ -2.31
NYV1YLR093C TY1B-ORQ92393 1755 aa0.65□□□□□ -2.31
NYV1YLR093C MOT1P32333 1867 aa0.65□□□□□ -2.31
NYV1YLR093C ESP1Q03018 1630 aa0.64□□□□□ -2.31
NYV1YLR093C YKL018C-AQ3E7A7 99 aa0.64□□□□□ -2.31
NYV1YLR093C YGR035W-AQ45U48 73 aa0.64□□□□□ -2.31
NYV1YLR093C TY1B-LR3P0C2I6 1755 aaKnown RBP0.64□□□□□ -2.31
NYV1YLR093C TY1B-DR3Q99231 1755 aa0.64□□□□□ -2.31
NYV1YLR093C ATX1P38636 73 aa0.63□□□□□ -2.31
NYV1YLR093C HKR1P41809 1802 aa0.62□□□□□ -2.31
NYV1YLR093C YOR032W-AQ8TGS1 66 aa0.62□□□□□ -2.31
NYV1YLR093C TY2B-CP25384 1770 aa0.62□□□□□ -2.31
NYV1YLR093C TY2B-DR1Q12472 1770 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms