RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W RPB7P34087 171 aa1.48□□□□□ -2.17
NUP100YKL068W YHR138CP38841 114 aaPredicted RBP1.48□□□□□ -2.17
NUP100YKL068W POC4Q12245 148 aaPredicted RBP1.48□□□□□ -2.17
NUP100YKL068W PCC1Q3E833 88 aa1.48□□□□□ -2.17
NUP100YKL068W QCR8P08525 94 aa1.47□□□□□ -2.17
NUP100YKL068W YLR194CQ05777 254 aa1.47□□□□□ -2.17
NUP100YKL068W NRG2P38082 220 aa1.47□□□□□ -2.17
NUP100YKL068W YBR027CP38220 110 aa1.47□□□□□ -2.17
NUP100YKL068W COX23P38824 151 aa1.47□□□□□ -2.17
NUP100YKL068W SNN1P48232 102 aa1.47□□□□□ -2.17
NUP100YKL068W SML1Q04964 104 aa1.47□□□□□ -2.17
NUP100YKL068W BLM10P43583 2143 aa1.47□□□□□ -2.17
NUP100YKL068W CDC39P25655 2108 aaKnown RBP1.46□□□□□ -2.18
NUP100YKL068W YHL005CP38752 130 aa1.46□□□□□ -2.18
NUP100YKL068W CWP2P43497 92 aa1.46□□□□□ -2.18
NUP100YKL068W YCR085WP25650 117 aa1.46□□□□□ -2.18
NUP100YKL068W PAU16P35994 123 aa1.46□□□□□ -2.18
NUP100YKL068W ATG8P38182 117 aaRIP-Chip data1.46□□□□□ -2.18not detected
NUP100YKL068W PAU15P40585 124 aa1.46□□□□□ -2.18
NUP100YKL068W FLO9P39712 1322 aa1.46□□□□□ -2.18
NUP100YKL068W RPA12P32529 125 aaKnown RBP1.45□□□□□ -2.18
NUP100YKL068W YLR363W-AQ3E747 85 aa1.45□□□□□ -2.18
NUP100YKL068W RPL36BO14455 100 aaKnown RBP1.45□□□□□ -2.18
NUP100YKL068W RPL36AP05745 100 aaPredicted RBP1.45□□□□□ -2.18
NUP100YKL068W YFL065CP43539 102 aa1.45□□□□□ -2.18
NUP100YKL068W YHR007C-AQ07074 71 aa1.45□□□□□ -2.18
NUP100YKL068W YPR203WQ08994 102 aa1.45□□□□□ -2.18
NUP100YKL068W DAN1P47178 298 aa1.45□□□□□ -2.18
NUP100YKL068W ICY1Q04329 127 aa1.45□□□□□ -2.18
NUP100YKL068W YHR213W-AQ8TGT4 77 aa1.45□□□□□ -2.18
NUP100YKL068W YBR013CP38215 129 aa1.44□□□□□ -2.18
NUP100YKL068W POR2P40478 281 aa1.44□□□□□ -2.18
NUP100YKL068W EMC6Q12431 108 aa1.44□□□□□ -2.18
NUP100YKL068W SUS1Q6WNK7 96 aa1.44□□□□□ -2.18
NUP100YKL068W CYR1P08678 2026 aaKnown RBP1.44□□□□□ -2.18
NUP100YKL068W RSM18P40033 138 aa1.44□□□□□ -2.18
NUP100YKL068W PAU5P43575 122 aa1.44□□□□□ -2.18
NUP100YKL068W MIX17Q03667 156 aa1.44□□□□□ -2.18
NUP100YKL068W ENV10Q99382 181 aa1.44□□□□□ -2.18
NUP100YKL068W GCV3P39726 170 aaPredicted RBP1.43□□□□□ -2.18
NUP100YKL068W IMP2P46972 177 aa1.43□□□□□ -2.18
NUP100YKL068W COA4Q05809 96 aa1.43□□□□□ -2.18
NUP100YKL068W YGL014C-AP0C5N1 53 aa1.43□□□□□ -2.18
NUP100YKL068W PRM3Q08931 133 aa1.43□□□□□ -2.18
NUP100YKL068W ROX3P25046 220 aa1.42□□□□□ -2.18
NUP100YKL068W YHL037CP38733 133 aa1.42□□□□□ -2.18
NUP100YKL068W DSE2P38844 325 aa1.42□□□□□ -2.18
NUP100YKL068W LST8P41318 303 aa1.42□□□□□ -2.18
NUP100YKL068W HPA2Q06592 156 aa1.42□□□□□ -2.18
NUP100YKL068W MHF1Q3E835 90 aa1.42□□□□□ -2.18
NUP100YKL068W LSM2P38203 95 aaKnown RBP1.42□□□□□ -2.18
NUP100YKL068W YEL008WP40001 126 aa1.42□□□□□ -2.18
NUP100YKL068W ICS3P47034 131 aa1.42□□□□□ -2.18
NUP100YKL068W SED1Q01589 338 aa1.42□□□□□ -2.18
NUP100YKL068W TAR1Q8TGM6 124 aa1.42□□□□□ -2.18
NUP100YKL068W YGR035W-AQ45U48 73 aa1.41□□□□□ -2.18
NUP100YKL068W RPS22AP0C0W1 130 aaKnown RBP1.41□□□□□ -2.18
NUP100YKL068W AIM4P38305 123 aaPredicted RBP1.41□□□□□ -2.18
NUP100YKL068W YDR119W-AQ2V2P9 66 aa1.41□□□□□ -2.18
NUP100YKL068W PFY1P07274 126 aa1.4□□□□□ -2.19
NUP100YKL068W TOM6P33448 61 aa1.4□□□□□ -2.19
NUP100YKL068W RPL33AP05744 107 aaKnown RBP1.4□□□□□ -2.19
NUP100YKL068W HMRA2P0CY13 119 aa1.4□□□□□ -2.19
NUP100YKL068W YLR285C-AQ3E771 56 aa1.4□□□□□ -2.19
NUP100YKL068W MRPL38P35996 138 aaPredicted RBP1.39□□□□□ -2.19
NUP100YKL068W YMR122CQ03879 124 aa1.39□□□□□ -2.19
NUP100YKL068W YOL118CQ08259 102 aa1.39□□□□□ -2.19
NUP100YKL068W YFR010W-AP0C5N0 62 aa1.39□□□□□ -2.19
NUP100YKL068W VAM10Q08474 114 aa1.39□□□□□ -2.19
NUP100YKL068W RPL22AP05749 121 aaKnown RBP1.38□□□□□ -2.19
NUP100YKL068W YIL163CP40448 117 aa1.38□□□□□ -2.19
NUP100YKL068W YDL012CQ12489 107 aa1.38□□□□□ -2.19
NUP100YKL068W PAI3P01094 68 aa1.38□□□□□ -2.19
NUP100YKL068W LSM6Q06406 86 aaKnown RBP1.38□□□□□ -2.19
NUP100YKL068W YCL048W-AQ2V2Q2 79 aa1.38□□□□□ -2.19
NUP100YKL068W YHR086W-AQ3E746 53 aa1.38□□□□□ -2.19
NUP100YKL068W RPS22BQ3E7Y3 130 aaKnown RBP1.38□□□□□ -2.19
NUP100YKL068W YBR219CP38317 127 aa1.37□□□□□ -2.19
NUP100YKL068W NHP2P32495 156 aaPredicted RBP1.37□□□□□ -2.19
NUP100YKL068W VPS55P47111 140 aa1.37□□□□□ -2.19
NUP100YKL068W YOR032W-AQ8TGS1 66 aa1.37□□□□□ -2.19
NUP100YKL068W SLH1P53327 1967 aaKnown RBP1.37□□□□□ -2.19
NUP100YKL068W YPR096CO13587 100 aa1.37□□□□□ -2.19
NUP100YKL068W YSF3P0C074 85 aaPredicted RBP1.37□□□□□ -2.19
NUP100YKL068W YDR210WQ03482 75 aa1.37□□□□□ -2.19
NUP100YKL068W YPR145C-AQ2V2P0 78 aa1.37□□□□□ -2.19
NUP100YKL068W YDR381C-AQ3E6R5 114 aa1.37□□□□□ -2.19
NUP100YKL068W YCR095W-AQ3E787 52 aa1.37□□□□□ -2.19
NUP100YKL068W YHR214C-DP0CX93 97 aa1.36□□□□□ -2.19
NUP100YKL068W MIC27P50945 234 aa1.36□□□□□ -2.19
NUP100YKL068W MRPS12P53732 153 aa1.36□□□□□ -2.19
NUP100YKL068W YLR162WQ06235 118 aa1.36□□□□□ -2.19
NUP100YKL068W PRM7Q12459 698 aa1.36□□□□□ -2.19
NUP100YKL068W SWM2P40342 146 aa1.35□□□□□ -2.19
NUP100YKL068W YIL086CP40503 102 aa1.35□□□□□ -2.19
NUP100YKL068W SPC1P46965 94 aa1.35□□□□□ -2.19
NUP100YKL068W CCW12Q12127 133 aa1.35□□□□□ -2.19
NUP100YKL068W YOR343CQ12484 108 aa1.35□□□□□ -2.19
NUP100YKL068W COA3Q3E7B2 85 aa1.35□□□□□ -2.19
NUP100YKL068W MRP17P28778 131 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms