RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A RPL36AP05745 100 aaPredicted RBP-0.44□□□□□ -2.48
TFB5YDR079C-A RPL31BP0C2H9 113 aaKnown RBP-0.44□□□□□ -2.48
TFB5YDR079C-A RPL23AP0CX41 137 aaKnown RBP-0.44□□□□□ -2.48
TFB5YDR079C-A RPL23BP0CX42 137 aaKnown RBP-0.44□□□□□ -2.48
TFB5YDR079C-A CNB1P25296 175 aa-0.44□□□□□ -2.48
TFB5YDR079C-A DPB3P27344 201 aa-0.44□□□□□ -2.48
TFB5YDR079C-A HMX1P32339 317 aa-0.44□□□□□ -2.48
TFB5YDR079C-A ASF2P32448 525 aaPredicted RBP-0.44□□□□□ -2.48
TFB5YDR079C-A SNC2P33328 115 aa-0.44□□□□□ -2.48
TFB5YDR079C-A LSM2P38203 95 aaKnown RBP-0.44□□□□□ -2.48
TFB5YDR079C-A YBR032WP38223 100 aa-0.44□□□□□ -2.48
TFB5YDR079C-A AME1P38313 324 aa-0.44□□□□□ -2.48
TFB5YDR079C-A RSM19P53733 91 aaPredicted RBP-0.44□□□□□ -2.48
TFB5YDR079C-A MRX7P53869 86 aa-0.44□□□□□ -2.48
TFB5YDR079C-A TLG1Q03322 224 aa-0.44□□□□□ -2.48
TFB5YDR079C-A ACL4Q03771 387 aa-0.44□□□□□ -2.48
TFB5YDR079C-A ATG16Q03818 150 aa-0.44□□□□□ -2.48
TFB5YDR079C-A PKR1Q03880 122 aaKnown RBP-0.44□□□□□ -2.48
TFB5YDR079C-A SPC19Q03954 165 aa-0.44□□□□□ -2.48
TFB5YDR079C-A DYN3Q04949 312 aa-0.44□□□□□ -2.48
TFB5YDR079C-A FRQ1Q06389 190 aa-0.44□□□□□ -2.48
TFB5YDR079C-A SYM1Q06563 197 aa-0.44□□□□□ -2.48
TFB5YDR079C-A YDL121CQ07541 149 aa-0.44□□□□□ -2.48
TFB5YDR079C-A UAF30Q08747 228 aa-0.44□□□□□ -2.48
TFB5YDR079C-A YOR283WQ12040 230 aaKnown RBP-0.44□□□□□ -2.48
TFB5YDR079C-A POM33Q12164 279 aa-0.44□□□□□ -2.48
TFB5YDR079C-A ATP16Q12165 160 aa-0.44□□□□□ -2.48
TFB5YDR079C-A POC4Q12245 148 aaPredicted RBP-0.44□□□□□ -2.48
TFB5YDR079C-A YDR182W-AQ3E796 67 aa-0.44□□□□□ -2.48
TFB5YDR079C-A YLR342W-AQ3E810 57 aa-0.44□□□□□ -2.48
TFB5YDR079C-A YKL068W-AQ3E826 78 aa-0.44□□□□□ -2.48
TFB5YDR079C-A HUG1Q6Q5K6 68 aa-0.44□□□□□ -2.48
TFB5YDR079C-A SAS5Q99314 248 aa-0.44□□□□□ -2.48
TFB5YDR079C-A YMR316C-AI2HB70 103 aa-0.45□□□□□ -2.48
TFB5YDR079C-A YOR304C-AO14468 76 aa-0.45□□□□□ -2.48
TFB5YDR079C-A YBR085C-AO43137 85 aa-0.45□□□□□ -2.48
TFB5YDR079C-A RNR2P09938 399 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A YFR009W-AP0C5M9 85 aa-0.45□□□□□ -2.48
TFB5YDR079C-A URA5P13298 226 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A MAG1P22134 296 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A YKT6P36015 200 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A GPX2P38143 162 aa-0.45□□□□□ -2.48
TFB5YDR079C-A POP7P38291 140 aa-0.45□□□□□ -2.48
TFB5YDR079C-A GOS1P38736 223 aa-0.45□□□□□ -2.48
TFB5YDR079C-A YHR140WP38842 239 aa-0.45□□□□□ -2.48
TFB5YDR079C-A BFR1P38934 470 aaKnown RBP RIP-Chip data-0.45□□□□□ -2.48not detected
TFB5YDR079C-A YMR141CP40211 102 aa-0.45□□□□□ -2.48
TFB5YDR079C-A SWM2P40342 146 aa-0.45□□□□□ -2.48
TFB5YDR079C-A INA22P40576 216 aa-0.45□□□□□ -2.48
TFB5YDR079C-A YFR057WP43625 151 aa-0.45□□□□□ -2.48
TFB5YDR079C-A RPA34P47006 233 aaPredicted RBP-0.45□□□□□ -2.48
TFB5YDR079C-A MIC27P50945 234 aa-0.45□□□□□ -2.48
TFB5YDR079C-A DOC1P53068 250 aa-0.45□□□□□ -2.48
TFB5YDR079C-A YGL204CP53089 101 aa-0.45□□□□□ -2.48
TFB5YDR079C-A HCH1P53834 153 aa-0.45□□□□□ -2.48
TFB5YDR079C-A LSM7P53905 115 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A SNZ1Q03148 297 aa-0.45□□□□□ -2.48
TFB5YDR079C-A HNT1Q04344 158 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A SEN15Q04675 128 aa-0.45□□□□□ -2.48
TFB5YDR079C-A TSR2Q06672 205 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A NSL1Q12143 216 aa-0.45□□□□□ -2.48
TFB5YDR079C-A ERG27Q12452 347 aaKnown RBP-0.45□□□□□ -2.48
TFB5YDR079C-A YKL065W-AQ2V2P2 73 aa-0.45□□□□□ -2.48
TFB5YDR079C-A YDR381C-AQ3E6R5 114 aa-0.45□□□□□ -2.48
TFB5YDR079C-A YMR030W-AQ3E760 96 aa-0.45□□□□□ -2.48
TFB5YDR079C-A COA6Q3E846 104 aa-0.45□□□□□ -2.48
TFB5YDR079C-A QCR7P00128 127 aa-0.46□□□□□ -2.48
TFB5YDR079C-A QCR8P08525 94 aa-0.46□□□□□ -2.48
TFB5YDR079C-A SEC11P15367 167 aa-0.46□□□□□ -2.48
TFB5YDR079C-A HSP12P22943 109 aaKnown RBP-0.46□□□□□ -2.48
TFB5YDR079C-A NUF2P33895 451 aa-0.46□□□□□ -2.48
TFB5YDR079C-A YKL044WP36092 106 aa-0.46□□□□□ -2.48
TFB5YDR079C-A MRPL11P36521 249 aaPredicted RBP-0.46□□□□□ -2.48
TFB5YDR079C-A PET100P38958 111 aa-0.46□□□□□ -2.48
TFB5YDR079C-A SRP14P38985 146 aa-0.46□□□□□ -2.48
TFB5YDR079C-A SPC25P40014 221 aa-0.46□□□□□ -2.48
TFB5YDR079C-A GVP36P40531 326 aaKnown RBP-0.46□□□□□ -2.48
TFB5YDR079C-A MSS2P40990 351 aa-0.46□□□□□ -2.48
TFB5YDR079C-A JAC1P53193 184 aa-0.46□□□□□ -2.48
TFB5YDR079C-A DAD3P69850 94 aa-0.46□□□□□ -2.48
TFB5YDR079C-A DAD4P69851 72 aa-0.46□□□□□ -2.48
TFB5YDR079C-A APS2Q00381 147 aa-0.46□□□□□ -2.48
TFB5YDR079C-A IRC21Q04772 201 aa-0.46□□□□□ -2.48
TFB5YDR079C-A NMA1Q06178 401 aaKnown RBP-0.46□□□□□ -2.48
TFB5YDR079C-A CSM4Q08955 156 aa-0.46□□□□□ -2.48
TFB5YDR079C-A FCF2Q12035 217 aaPredicted RBP-0.46□□□□□ -2.48
TFB5YDR079C-A HTZ1Q12692 134 aaKnown RBP-0.46□□□□□ -2.48
TFB5YDR079C-A YGL194C-AQ2V2P6 80 aa-0.46□□□□□ -2.48
TFB5YDR079C-A YGR161W-CQ3E744 92 aa-0.46□□□□□ -2.48
TFB5YDR079C-A YBR072C-AQ3E794 53 aa-0.46□□□□□ -2.48
TFB5YDR079C-A YIL134C-AQ45U18 67 aa-0.46□□□□□ -2.48
TFB5YDR079C-A YPR014CQ6B0W2 109 aa-0.46□□□□□ -2.48
TFB5YDR079C-A YHR213W-BQ8TGK1 99 aa-0.46□□□□□ -2.48
TFB5YDR079C-A FMP49A0A023PZB3 126 aa-0.47□□□□□ -2.48
TFB5YDR079C-A RPS25BP0C0T4 108 aaKnown RBP-0.47□□□□□ -2.48
TFB5YDR079C-A RPL31AP0C2H8 113 aaKnown RBP-0.47□□□□□ -2.48
TFB5YDR079C-A BLI1P35727 113 aa-0.47□□□□□ -2.48
TFB5YDR079C-A SHE2P36068 246 aaKnown RBP RIP-Chip data-0.47□□□□□ -2.48not detected
TFB5YDR079C-A GDT1P38301 280 aaPredicted RBP-0.47□□□□□ -2.48
TFB5YDR079C-A TDA2P40045 126 aa-0.47□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms