RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YNL190WP53872 204 aa1.69□□□□□ -2.14
MCD1YDL003W MOT3P54785 490 aaKnown RBP1.69□□□□□ -2.14
MCD1YDL003W NCE102Q12207 173 aaRIP-Chip data1.69□□□□□ -2.14not detected
MCD1YDL003W YDL009CQ12210 107 aa1.69□□□□□ -2.14
MCD1YDL003W PRM7Q12459 698 aa1.69□□□□□ -2.14
MCD1YDL003W YDL022C-AP0C5L6 82 aa1.69□□□□□ -2.14
MCD1YDL003W RPL38P49167 78 aaKnown RBP1.69□□□□□ -2.14
MCD1YDL003W YKL065W-AQ2V2P2 73 aa1.69□□□□□ -2.14
MCD1YDL003W RRT15Q3E811 62 aa1.69□□□□□ -2.14
MCD1YDL003W YOR020W-AQ3E824 90 aa1.69□□□□□ -2.14
MCD1YDL003W CYR1P08678 2026 aaKnown RBP1.68□□□□□ -2.14
MCD1YDL003W RPL36BO14455 100 aaKnown RBP1.68□□□□□ -2.14
MCD1YDL003W RPL36AP05745 100 aaPredicted RBP1.68□□□□□ -2.14
MCD1YDL003W YEL045CP32616 141 aa1.68□□□□□ -2.14
MCD1YDL003W YBL081WP38180 368 aaKnown RBP1.68□□□□□ -2.14
MCD1YDL003W GAT4P40569 121 aa1.68□□□□□ -2.14
MCD1YDL003W YIR020CP40575 100 aa1.68□□□□□ -2.14
MCD1YDL003W IMP2P46972 177 aa1.68□□□□□ -2.14
MCD1YDL003W YGL088WP53151 121 aa1.68□□□□□ -2.14
MCD1YDL003W ERI1P62651 68 aaKnown RBP1.68□□□□□ -2.14
MCD1YDL003W SMD1Q02260 146 aaPredicted RBP1.68□□□□□ -2.14
MCD1YDL003W YOR268CQ08734 132 aa1.68□□□□□ -2.14
MCD1YDL003W YDR182W-AQ3E796 67 aa1.68□□□□□ -2.14
MCD1YDL003W TDA8Q6B2U8 126 aa1.68□□□□□ -2.14
MCD1YDL003W OST5Q92316 86 aa1.68□□□□□ -2.14
MCD1YDL003W YHR213WP0CI67 198 aa1.67□□□□□ -2.14
MCD1YDL003W RPS27AP35997 82 aaKnown RBP1.67□□□□□ -2.14
MCD1YDL003W RPS27BP38711 82 aa1.67□□□□□ -2.14
MCD1YDL003W YHL005CP38752 130 aa1.67□□□□□ -2.14
MCD1YDL003W ARC15P40518 154 aaRIP-Chip data1.67□□□□□ -2.14not detected
MCD1YDL003W MRPS12P53732 153 aa1.67□□□□□ -2.14
MCD1YDL003W SPG4Q04438 115 aa1.67□□□□□ -2.14
MCD1YDL003W YAL065CO13511 128 aa1.66□□□□□ -2.14
MCD1YDL003W CDC39P25655 2108 aaKnown RBP1.66□□□□□ -2.14
MCD1YDL003W YKR045CP36138 183 aa1.66□□□□□ -2.14
MCD1YDL003W ATP18P81450 59 aa1.66□□□□□ -2.14
MCD1YDL003W YDR274CP87283 123 aa1.66□□□□□ -2.14
MCD1YDL003W RGM1Q00453 211 aa1.66□□□□□ -2.14
MCD1YDL003W YDR524C-BQ3E6R4 66 aa1.66□□□□□ -2.14
MCD1YDL003W SPO24Q3E752 67 aa1.66□□□□□ -2.14
MCD1YDL003W YOR376W-AQ3E805 51 aa1.66□□□□□ -2.14
MCD1YDL003W NAG1Q8TGN9 163 aa1.66□□□□□ -2.14
MCD1YDL003W MRPL38P35996 138 aaPredicted RBP1.66□□□□□ -2.14
MCD1YDL003W YIL102CP40488 101 aa1.66□□□□□ -2.14
MCD1YDL003W YFR035CP43608 114 aa1.66□□□□□ -2.14
MCD1YDL003W YJR146WP47174 117 aa1.66□□□□□ -2.14
MCD1YDL003W PGU1P47180 361 aa1.66□□□□□ -2.14
MCD1YDL003W YDR114CQ04597 100 aa1.66□□□□□ -2.14
MCD1YDL003W YLR162WQ06235 118 aa1.66□□□□□ -2.14
MCD1YDL003W YML100W-AQ8TGT0 57 aa1.66□□□□□ -2.14
MCD1YDL003W YAL064WP39711 94 aa1.65□□□□□ -2.15
MCD1YDL003W MIG3P39943 394 aa1.65□□□□□ -2.15
MCD1YDL003W TOS8P53147 276 aa1.65□□□□□ -2.15
MCD1YDL003W YMR122CQ03879 124 aa1.65□□□□□ -2.15
MCD1YDL003W RNH203Q12338 110 aa1.65□□□□□ -2.15
MCD1YDL003W YOR034C-AQ3E735 80 aa1.65□□□□□ -2.15
MCD1YDL003W NOP10Q6Q547 58 aaPredicted RBP1.65□□□□□ -2.15
MCD1YDL003W YER188C-AP0C0V2 99 aa1.64□□□□□ -2.15
MCD1YDL003W RPS23AP0CX29 145 aaKnown RBP1.64□□□□□ -2.15
MCD1YDL003W RPS23BP0CX30 145 aa1.64□□□□□ -2.15
MCD1YDL003W RPS30AP0CX33 63 aaKnown RBP1.64□□□□□ -2.15
MCD1YDL003W RPS30BP0CX34 63 aaKnown RBP1.64□□□□□ -2.15
MCD1YDL003W DDR48P18899 430 aaKnown RBP1.64□□□□□ -2.15
MCD1YDL003W FPR1P20081 114 aaKnown RBP1.64□□□□□ -2.15
MCD1YDL003W RPB9P27999 122 aa1.64□□□□□ -2.15
MCD1YDL003W MRPL39P36533 70 aa1.64□□□□□ -2.15
MCD1YDL003W YER135CP40082 130 aa1.64□□□□□ -2.15
MCD1YDL003W POR2P40478 281 aa1.64□□□□□ -2.15
MCD1YDL003W SPC1P46965 94 aa1.64□□□□□ -2.15
MCD1YDL003W EDC1P53080 175 aaPredicted RBP1.64□□□□□ -2.15
MCD1YDL003W YGL034CP53186 121 aa1.64□□□□□ -2.15
MCD1YDL003W YDR246W-AQ3E763 66 aa1.64□□□□□ -2.15
MCD1YDL003W YGR121W-AQ3E816 71 aa1.64□□□□□ -2.15
MCD1YDL003W HUB1Q6Q546 73 aa1.64□□□□□ -2.15
MCD1YDL003W YOR032W-AQ8TGS1 66 aa1.64□□□□□ -2.15
MCD1YDL003W YLR236CA0A023PZG4 107 aa1.63□□□□□ -2.15
MCD1YDL003W YEL008WP40001 126 aa1.63□□□□□ -2.15
MCD1YDL003W YER084WP40057 128 aa1.63□□□□□ -2.15
MCD1YDL003W RPR2P40571 144 aa1.63□□□□□ -2.15
MCD1YDL003W YJL027CP47063 138 aaPredicted RBP1.63□□□□□ -2.15
MCD1YDL003W SIP18P50263 79 aa1.63□□□□□ -2.15
MCD1YDL003W PMP3P87284 55 aa1.63□□□□□ -2.15
MCD1YDL003W YMR244WQ04018 355 aa1.63□□□□□ -2.15
MCD1YDL003W YPR153WQ06537 140 aa1.63□□□□□ -2.15
MCD1YDL003W YOL160WQ08321 113 aa1.63□□□□□ -2.15
MCD1YDL003W YBR200W-AQ3E755 54 aa1.63□□□□□ -2.15
MCD1YDL003W YCR095W-AQ3E787 52 aa1.63□□□□□ -2.15
MCD1YDL003W YLL006W-AQ3E814 58 aa1.63□□□□□ -2.15
MCD1YDL003W YIL086CP40503 102 aa1.63□□□□□ -2.15
MCD1YDL003W SED1Q01589 338 aa1.63□□□□□ -2.15
MCD1YDL003W FYV5P25585 152 aa1.62□□□□□ -2.15
MCD1YDL003W UTH1P36135 365 aa1.62□□□□□ -2.15
MCD1YDL003W YPS5P53057 165 aa1.62□□□□□ -2.15
MCD1YDL003W YGL193CP53097 103 aa1.62□□□□□ -2.15
MCD1YDL003W SNA2P56508 79 aa1.62□□□□□ -2.15
MCD1YDL003W COX17Q12287 69 aa1.62□□□□□ -2.15
MCD1YDL003W YGR035W-AQ45U48 73 aa1.62□□□□□ -2.15
MCD1YDL003W HHF1P02309 103 aaKnown RBP1.61□□□□□ -2.15
MCD1YDL003W RPL39P04650 51 aa1.61□□□□□ -2.15
MCD1YDL003W COX14P39103 70 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms