RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	SPC1	P46965	94 aa		-1.2	□□□□□ -2.6
HMRA2	YCR096C	SPC2	Q04969	178 aa		-1.2	□□□□□ -2.6
HMRA2	YCR096C	RPS29A	P41057	56 aa	Known RBP	-1.21	□□□□□ -2.6
HMRA2	YCR096C	PAU4	P53427	120 aa		-1.21	□□□□□ -2.6
HMRA2	YCR096C	NHP10	Q03435	203 aa		-1.21	□□□□□ -2.6
HMRA2	YCR096C	YBL044W	P38194	122 aa		-1.22	□□□□□ -2.6
HMRA2	YCR096C	TY3B-I	Q7LHG5	1498 aa	Known RBP	-1.23	□□□□□ -2.61
HMRA2	YCR096C	UBC4	P15731	148 aa		-1.23	□□□□□ -2.61
HMRA2	YCR096C	UBC5	P15732	148 aa		-1.23	□□□□□ -2.61
HMRA2	YCR096C	RSM19	P53733	91 aa	Predicted RBP	-1.23	□□□□□ -2.61
HMRA2	YCR096C	TY1B-DR5	P0C2I2	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-JR1	P47098	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-ML2	Q03434	1755 aa	Known RBP	-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-ER1	Q03612	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-ER2	Q03619	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-DR1	Q03855	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-ML1	Q04711	1755 aa	Known RBP	-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-LR1	Q12088	1755 aa	Known RBP	-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-GR2	Q12269	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-OL	Q12273	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	TY1B-DR3	Q99231	1755 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	ECM12	O13529	151 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	SPP41	P38904	1435 aa		-1.24	□□□□□ -2.61
HMRA2	YCR096C	YMR103C	Q04436	120 aa		-1.25	□□□□□ -2.61
HMRA2	YCR096C	WIP1	Q2V2P8	89 aa		-1.25	□□□□□ -2.61
HMRA2	YCR096C	TOM6	P33448	61 aa		-1.26	□□□□□ -2.61
HMRA2	YCR096C	YBR090C	P38253	122 aa		-1.26	□□□□□ -2.61
HMRA2	YCR096C	GNA1	P43577	159 aa	Predicted RBP	-1.26	□□□□□ -2.61
HMRA2	YCR096C	SDH6	Q3E785	79 aa		-1.27	□□□□□ -2.61
HMRA2	YCR096C	YMR122W-A	Q3E842	84 aa		-1.27	□□□□□ -2.61
HMRA2	YCR096C	ECM29	P38737	1868 aa		-1.27	□□□□□ -2.61
HMRA2	YCR096C	YOR289W	Q12012	251 aa	Predicted RBP	-1.28	□□□□□ -2.61
HMRA2	YCR096C	TY2B-LR1	P0C2J3	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-F	P0CX63	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-GR2	P0CX64	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-C	P25384	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-DR2	Q03494	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-DR3	Q07791	1770 aa	Known RBP	-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-OR1	Q12113	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-DR1	Q12472	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-B	Q12491	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	TY2B-OR2	Q12501	1770 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	YHL005C	P38752	130 aa		-1.29	□□□□□ -2.62
HMRA2	YCR096C	MMS1	Q06211	1407 aa		-1.3	□□□□□ -2.62
HMRA2	YCR096C	YMR090W	Q04304	227 aa	Known RBP	-1.3	□□□□□ -2.62
HMRA2	YCR096C	RRT15	Q3E811	62 aa		-1.31	□□□□□ -2.62
HMRA2	YCR096C	EDC1	P53080	175 aa	Predicted RBP	-1.32	□□□□□ -2.62
HMRA2	YCR096C	ATP18	P81450	59 aa		-1.32	□□□□□ -2.62
HMRA2	YCR096C	YAL065C	O13511	128 aa		-1.33	□□□□□ -2.62
HMRA2	YCR096C	HMRA1	P0CY11	126 aa		-1.33	□□□□□ -2.62
HMRA2	YCR096C	LHP1	P33399	275 aa	Known RBP	-1.33	□□□□□ -2.62
HMRA2	YCR096C	MOT1	P32333	1867 aa		-1.33	□□□□□ -2.62
HMRA2	YCR096C	YHR214C-D	P0CX93	97 aa		-1.34	□□□□□ -2.62
HMRA2	YCR096C	BSC4	P53841	131 aa		-1.34	□□□□□ -2.62
HMRA2	YCR096C	KSH1	Q8TGJ3	72 aa		-1.34	□□□□□ -2.62
HMRA2	YCR096C	RGI1	P40043	161 aa	Predicted RBP	-1.35	□□□□□ -2.63
HMRA2	YCR096C	EMC5	P40540	141 aa		-1.35	□□□□□ -2.63
HMRA2	YCR096C	YOR304C-A	O14468	76 aa		-1.36	□□□□□ -2.63
HMRA2	YCR096C	YMR001C-A	Q8TGS9	76 aa		-1.36	□□□□□ -2.63
HMRA2	YCR096C	GEA1	P47102	1408 aa	Predicted RBP	-1.37	□□□□□ -2.63
HMRA2	YCR096C	RPA190	P10964	1664 aa	Known RBP	-1.37	□□□□□ -2.63
HMRA2	YCR096C	POL1	P13382	1468 aa		-1.37	□□□□□ -2.63
HMRA2	YCR096C	PDR11	P40550	1411 aa		-1.38	□□□□□ -2.63
HMRA2	YCR096C	YCR085W	P25650	117 aa		-1.38	□□□□□ -2.63
HMRA2	YCR096C	YPR108W-A	Q3E7B3	70 aa		-1.38	□□□□□ -2.63
HMRA2	YCR096C	TSC11	P40061	1430 aa		-1.4	□□□□□ -2.63
HMRA2	YCR096C	SNU13	P39990	126 aa	Known RBP	-1.4	□□□□□ -2.63
HMRA2	YCR096C	UTP10	P42945	1769 aa	Known RBP	-1.41	□□□□□ -2.63
HMRA2	YCR096C	YBR032W	P38223	100 aa		-1.41	□□□□□ -2.64
HMRA2	YCR096C	XRN1	P22147	1528 aa	Known RBP	-1.43	□□□□□ -2.64
HMRA2	YCR096C	FPR2	P32472	135 aa		-1.43	□□□□□ -2.64
HMRA2	YCR096C	NHP2	P32495	156 aa	Predicted RBP	-1.43	□□□□□ -2.64
HMRA2	YCR096C	PAU23	Q07987	124 aa		-1.43	□□□□□ -2.64
HMRA2	YCR096C	PAU17	Q12370	124 aa		-1.43	□□□□□ -2.64
HMRA2	YCR096C	REV3	P14284	1504 aa		-1.45	□□□□□ -2.64
HMRA2	YCR096C	RPS12	P48589	143 aa	Known RBP	-1.45	□□□□□ -2.64
HMRA2	YCR096C	YDR029W	Q12111	104 aa		-1.46	□□□□□ -2.64
HMRA2	YCR096C	FMP27	Q06179	2628 aa		-1.47	□□□□□ -2.64
HMRA2	YCR096C	SPO14	P36126	1683 aa		-1.47	□□□□□ -2.64
HMRA2	YCR096C	YDR182W-A	Q3E796	67 aa		-1.47	□□□□□ -2.64
HMRA2	YCR096C	YER137C	P40083	148 aa	Known RBP	-1.48	□□□□□ -2.65
HMRA2	YCR096C	GEA2	P39993	1459 aa	Known RBP	-1.49	□□□□□ -2.65
HMRA2	YCR096C	VTH1	P40438	1549 aa		-1.49	□□□□□ -2.65
HMRA2	YCR096C	VTH2	P40890	1549 aa		-1.49	□□□□□ -2.65
HMRA2	YCR096C	GDB1	Q06625	1536 aa		-1.49	□□□□□ -2.65
HMRA2	YCR096C	NOP10	Q6Q547	58 aa	Predicted RBP	-1.49	□□□□□ -2.65
HMRA2	YCR096C	YDR042C	Q03205	200 aa		-1.5	□□□□□ -2.65
HMRA2	YCR096C	YPR117W	Q06116	2489 aa		-1.5	□□□□□ -2.65
HMRA2	YCR096C	TOR2	P32600	2474 aa	Known RBP	-1.51	□□□□□ -2.65
HMRA2	YCR096C	YOL097W-A	Q3E7Y9	61 aa		-1.51	□□□□□ -2.65
HMRA2	YCR096C	TY1B-NL2	Q99337	1749 aa	Known RBP	-1.52	□□□□□ -2.65
HMRA2	YCR096C	MSL1	P40567	111 aa	Predicted RBP	-1.52	□□□□□ -2.65
HMRA2	YCR096C	FYV7	Q12247	151 aa		-1.52	□□□□□ -2.65
HMRA2	YCR096C	YIL156W-B	Q2V2P4	73 aa		-1.52	□□□□□ -2.65
HMRA2	YCR096C	MHF2	Q3E829	80 aa		-1.52	□□□□□ -2.65
HMRA2	YCR096C	RPS27A	P35997	82 aa	Known RBP	-1.53	□□□□□ -2.65
HMRA2	YCR096C	YKL018C-A	Q3E7A7	99 aa		-1.55	□□□□□ -2.66
HMRA2	YCR096C	SUS1	Q6WNK7	96 aa		-1.55	□□□□□ -2.66
HMRA2	YCR096C	SCP1	Q08873	200 aa		-1.56	□□□□□ -2.66

Retrieved 100 of 5,963 RNA–protein pairs in 174 ms