RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W YCR085WP25650 117 aa0.77□□□□□ -2.29
PAF1YBR279W PAU13P38725 120 aa0.77□□□□□ -2.29
PAF1YBR279W RPS29BP41058 56 aaKnown RBP0.77□□□□□ -2.29
PAF1YBR279W SPC1P46965 94 aa0.77□□□□□ -2.29
PAF1YBR279W PAU10Q03050 120 aa0.77□□□□□ -2.29
PAF1YBR279W PAU20Q08322 120 aa0.77□□□□□ -2.29
PAF1YBR279W YDR010CQ12426 110 aa0.77□□□□□ -2.29
PAF1YBR279W PAU9Q3E770 120 aa0.77□□□□□ -2.29
PAF1YBR279W MMS22Q06164 1454 aa0.77□□□□□ -2.29
PAF1YBR279W BRR2P32639 2163 aaKnown RBP0.76□□□□□ -2.29
PAF1YBR279W TY1B-BRQ12193 1756 aa0.76□□□□□ -2.29
PAF1YBR279W TOM6P33448 61 aa0.76□□□□□ -2.29
PAF1YBR279W XRN1P22147 1528 aaKnown RBP0.76□□□□□ -2.29
PAF1YBR279W NHP2P32495 156 aaPredicted RBP0.75□□□□□ -2.29
PAF1YBR279W PAU4P53427 120 aa0.75□□□□□ -2.29
PAF1YBR279W YKL065W-AQ2V2P2 73 aa0.75□□□□□ -2.29
PAF1YBR279W TY1B-PR2P0C2J0 1756 aa0.75□□□□□ -2.29
PAF1YBR279W RIM15P43565 1770 aa0.75□□□□□ -2.29
PAF1YBR279W POC4Q12245 148 aaPredicted RBP0.74□□□□□ -2.29
PAF1YBR279W TY1B-BLQ12490 1755 aa0.74□□□□□ -2.29
PAF1YBR279W TY1B-NL2Q99337 1749 aaKnown RBP0.73□□□□□ -2.29
PAF1YBR279W YHR214C-DP0CX93 97 aa0.73□□□□□ -2.29
PAF1YBR279W YNL042W-BQ3E7Z2 85 aa0.73□□□□□ -2.29
PAF1YBR279W MOT1P32333 1867 aa0.73□□□□□ -2.29
PAF1YBR279W COX7P10174 60 aa0.72□□□□□ -2.29
PAF1YBR279W YHR173CP38864 112 aa0.72□□□□□ -2.29
PAF1YBR279W MLP1Q02455 1875 aaKnown RBP0.72□□□□□ -2.29
PAF1YBR279W AUA1P32450 94 aa0.71□□□□□ -2.3
PAF1YBR279W CWP2P43497 92 aa0.71□□□□□ -2.3
PAF1YBR279W YOR314WQ12506 109 aa0.71□□□□□ -2.3
PAF1YBR279W YDR381C-AQ3E6R5 114 aa0.71□□□□□ -2.3
PAF1YBR279W TY1B-DR6P0C2I3 1755 aa0.71□□□□□ -2.3
PAF1YBR279W TY1B-LR2P0C2I5 1755 aa0.71□□□□□ -2.3
PAF1YBR279W TY1B-PR3P0C2J1 1755 aaKnown RBP0.71□□□□□ -2.3
PAF1YBR279W TY1B-JR2P47100 1755 aaKnown RBP0.71□□□□□ -2.3
PAF1YBR279W TY1B-MR1Q04214 1755 aa0.71□□□□□ -2.3
PAF1YBR279W TY1B-MR2Q04670 1755 aaKnown RBP0.71□□□□□ -2.3
PAF1YBR279W TY1B-NL1Q12112 1755 aa0.71□□□□□ -2.3
PAF1YBR279W TY1B-GR1Q12141 1755 aa0.71□□□□□ -2.3
PAF1YBR279W TY1B-GR3Q12316 1755 aa0.71□□□□□ -2.3
PAF1YBR279W TY1B-PLQ12414 1755 aaKnown RBP0.71□□□□□ -2.3
PAF1YBR279W TY1B-ORQ92393 1755 aa0.71□□□□□ -2.3
PAF1YBR279W POL2P21951 2222 aaKnown RBP0.71□□□□□ -2.3
PAF1YBR279W YAL065CO13511 128 aa0.7□□□□□ -2.3
PAF1YBR279W NUP159P40477 1460 aa0.7□□□□□ -2.3
PAF1YBR279W TY1B-LR3P0C2I6 1755 aaKnown RBP0.7□□□□□ -2.3
PAF1YBR279W URA2P07259 2214 aaKnown RBP0.69□□□□□ -2.3
PAF1YBR279W YOL097W-AQ3E7Y9 61 aa0.69□□□□□ -2.3
PAF1YBR279W YMR122W-AQ3E842 84 aa0.69□□□□□ -2.3
PAF1YBR279W DOP1Q03921 1698 aa0.69□□□□□ -2.3
PAF1YBR279W ECM29P38737 1868 aa0.69□□□□□ -2.3
PAF1YBR279W SWM2P40342 146 aa0.68□□□□□ -2.3
PAF1YBR279W RPL38P49167 78 aaKnown RBP0.68□□□□□ -2.3
PAF1YBR279W YDR119W-AQ2V2P9 66 aa0.68□□□□□ -2.3
PAF1YBR279W YHR213W-AQ8TGT4 77 aa0.68□□□□□ -2.3
PAF1YBR279W Q0032Q9ZZX7 96 aa0.68□□□□□ -2.3
PAF1YBR279W UTP10P42945 1769 aaKnown RBP0.68□□□□□ -2.3
PAF1YBR279W SIN3P22579 1536 aa0.68□□□□□ -2.3
PAF1YBR279W FPR2P32472 135 aa0.67□□□□□ -2.3
PAF1YBR279W YOR105WQ08504 108 aa0.67□□□□□ -2.3
PAF1YBR279W YBR201C-AQ2V2Q3 67 aa0.67□□□□□ -2.3
PAF1YBR279W NOP10Q6Q547 58 aaPredicted RBP0.67□□□□□ -2.3
PAF1YBR279W FAS2P19097 1887 aaKnown RBP0.67□□□□□ -2.3
PAF1YBR279W YNL190WP53872 204 aa0.66□□□□□ -2.3
PAF1YBR279W ATP18P81450 59 aa0.66□□□□□ -2.3
PAF1YBR279W YGR121W-AQ3E816 71 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-DR5P0C2I2 1755 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-PR1P0C2I9 1755 aaKnown RBP0.66□□□□□ -2.3
PAF1YBR279W TY1B-JR1P47098 1755 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-ML2Q03434 1755 aaKnown RBP0.66□□□□□ -2.3
PAF1YBR279W TY1B-ER1Q03612 1755 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-ER2Q03619 1755 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-DR1Q03855 1755 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-ML1Q04711 1755 aaKnown RBP0.66□□□□□ -2.3
PAF1YBR279W TY1B-LR1Q12088 1755 aaKnown RBP0.66□□□□□ -2.3
PAF1YBR279W TY1B-GR2Q12269 1755 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-OLQ12273 1755 aa0.66□□□□□ -2.3
PAF1YBR279W TY1B-DR3Q99231 1755 aa0.66□□□□□ -2.3
PAF1YBR279W PAU23Q07987 124 aa0.65□□□□□ -2.3
PAF1YBR279W PAU17Q12370 124 aa0.65□□□□□ -2.3
PAF1YBR279W YPR145C-AQ2V2P0 78 aa0.65□□□□□ -2.3
PAF1YBR279W APC1P53886 1748 aa0.65□□□□□ -2.31
PAF1YBR279W YIL156W-BQ2V2P4 73 aa0.64□□□□□ -2.31
PAF1YBR279W MON2P48563 1636 aaPredicted RBP0.64□□□□□ -2.31
PAF1YBR279W TY2B-CP25384 1770 aa0.64□□□□□ -2.31
PAF1YBR279W TY2B-DR1Q12472 1770 aa0.64□□□□□ -2.31
PAF1YBR279W QCR9P22289 66 aa0.64□□□□□ -2.31
PAF1YBR279W YNL198CP40166 100 aa0.64□□□□□ -2.31
PAF1YBR279W RPC10P40422 70 aa0.64□□□□□ -2.31
PAF1YBR279W EDC1P53080 175 aaPredicted RBP0.64□□□□□ -2.31
PAF1YBR279W YGR035W-AQ45U48 73 aa0.63□□□□□ -2.31
PAF1YBR279W UFD4P33202 1483 aa0.62□□□□□ -2.31
PAF1YBR279W TY1B-DR4Q07793 1604 aa0.62□□□□□ -2.31
PAF1YBR279W STT4P37297 1900 aa0.62□□□□□ -2.31
PAF1YBR279W YBR032WP38223 100 aa0.62□□□□□ -2.31
PAF1YBR279W SDH6Q3E785 79 aa0.62□□□□□ -2.31
PAF1YBR279W YOL164W-AQ3E7A5 60 aa0.62□□□□□ -2.31
PAF1YBR279W RPO31P04051 1460 aa0.62□□□□□ -2.31
PAF1YBR279W IML1P47170 1584 aa0.62□□□□□ -2.31
PAF1YBR279W PMD1P32634 1753 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms