RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	FGFR1OP	O95684	399 aa	Known RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	FAM200B	P0CF97	657 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	HDC	P19113	662 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	TARS	P26639	723 aa	Known RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	ADORA2B	P29275	332 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	KPNA1	P52294	538 aa	Predicted RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	SLC5A3	P53794	718 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	IFRD2	Q12894	506 aa	Predicted RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	ARL14EP	Q8N8R7	260 aa	Predicted RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	ZMIZ2	Q8NF64	920 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	OVCA2	Q8WZ82	227 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	FBXO32	Q969P5	355 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	MSANTD3	Q96H12	275 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	HNRNPAB	Q99729	332 aa	Known RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	ARID3A	Q99856	593 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	SRRT	Q9BXP5	876 aa	Known RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	C8orf33	Q9H7E9	229 aa	Predicted RBP	15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	CSNK1G1	Q9HCP0	422 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	COMMD8	Q9NX08	183 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	GTSE1	Q9NYZ3	720 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	IL37	Q9NZH6	218 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	RWDD2A	Q9UIY3	292 aa		15.93	■□□□□ 0.14
PHGDH-231	ENST00000641939	NCAM2	O15394	837 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	BEST1	O76090	585 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	ABL1	P00519	1130 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	MAGEA9	P43362	315 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	MARS	P56192	900 aa	Known RBP	15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	MAP3K7CL	P57077	242 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	TNK2	Q07912	1038 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	CETN1	Q12798	172 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	CUL2	Q13617	745 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	ZNF394	Q53GI3	561 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	CC2D1A	Q6P1N0	951 aa	Predicted RBP	15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	C1orf228	Q6PIY5	440 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	PDZD8	Q8NEN9	1154 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	SCAMP5	Q8TAC9	235 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	RIN3	Q8TB24	985 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	FAM3C	Q92520	227 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	ATOH1	Q92858	354 aa	Predicted RBP	15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	HEXIM2	Q96MH2	286 aa	Known RBP	15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	FAM83C	Q9BQN1	747 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	GKN1	Q9NS71	199 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	LMBRD1	Q9NUN5	540 aa		15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	NDRG2	Q9UN36	371 aa	Known RBP	15.92	■□□□□ 0.14
PHGDH-231	ENST00000641939	P4HA2	O15460	535 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	OAS1	P00973	400 aa	Known RBP	15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	TCF3	P15923	654 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	RAD23B	P54727	409 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	YWHAE	P62258	255 aa	Known RBP	15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	USP4	Q13107	963 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	ANGPT1	Q15389	498 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	ZNF77	Q15935	545 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	ITPRIPL2	Q3MIP1	535 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	CLEC20A	Q6ZU45	233 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	RALGPS2	Q86X27	583 aa	Predicted RBP	15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	TRIM59	Q8IWR1	403 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	ZNF687	Q8N1G0	1237 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	MLKL	Q8NB16	471 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	SLC4A11	Q8NBS3	891 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	TTC8	Q8TAM2	541 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	CLDN23	Q96B33	292 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	TMEM176A	Q96HP8	235 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	IPO9	Q96P70	1041 aa	Known RBP	15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	GBP4	Q96PP9	640 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	NUP62CL	Q9H1M0	184 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	ARHGAP26	Q9UNA1	814 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	VPS13A	Q96RL7	3174 aa		15.91	■□□□□ 0.14
PHGDH-231	ENST00000641939	ATG2B	Q96BY7	2078 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	USP34	Q70CQ2	3546 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	FAM92A	A1XBS5	289 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	SPECC1L-ADORA2A	F8WAN1	911 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	CCDC192	P0DO97	292 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	TBXAS1	P24557	533 aa	Predicted RBP	15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	CTH	P32929	405 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	RPS9	P46781	194 aa	Known RBP	15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	SOX9	P48436	509 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	KCNH2	Q12809	1159 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	LRMP	Q12912	555 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	FZD5	Q13467	585 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	MTF1	Q14872	753 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	SNX30	Q5VWJ9	437 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	TRIM68	Q6AZZ1	485 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	C1orf210	Q8IVY1	113 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	TTC16	Q8NEE8	873 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	SH3RF2	Q8TEC5	729 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	NT5C1B	Q96P26	610 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	DUSP16	Q9BY84	665 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	FBXO44	Q9H4M3	255 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	EBF3	Q9H4W6	596 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	PNPLA8	Q9NP80	782 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	HPS4	Q9NQG7	708 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	FAM86C1	Q9NVL1	165 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	CHORDC1	Q9UHD1	332 aa	Predicted RBP	15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	FANCM	Q8IYD8	2048 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	RIF1	Q5UIP0	2472 aa	Known RBP	15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	MYOF	Q9NZM1	2061 aa		15.9	■□□□□ 0.14
PHGDH-231	ENST00000641939	HHLA1	C9JL84	531 aa		15.89	■□□□□ 0.13

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms