RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TMEM253P0C7T8 217 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 MYBL1P10243 752 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 ALDH1A3P47895 512 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 TKTL1P51854 596 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 PTP4A2Q12974 167 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 ARHGAP29Q52LW3 1261 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 OR6B2Q6IFH4 312 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 LLGL2Q6P1M3 1020 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 GPRIN1Q7Z2K8 1008 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 TMEM110Q86TL2 294 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 STKLD1Q8NE28 680 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 KIAA1524Q8TCG1 905 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 KCTD13Q8WZ19 329 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 C8orf48Q96LL4 319 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 UBXN6Q9BZV1 441 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 LACRTQ9GZZ8 138 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.41■□□□□ 0.54
PHGDH-230ENST00000641927 HHLA1C9JL84 531 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 CCP110O43303 1012 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
PHGDH-230ENST00000641927 GIPC2Q8TF65 315 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 ARHGEF26Q96DR7 871 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 PNPLA8Q9NP80 782 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 CYLDQ9NQC7 956 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 HSFX1Q9UBD0 423 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 TRIM10Q9UDY6 481 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 MAFFQ9ULX9 164 aa18.4■□□□□ 0.54
PHGDH-230ENST00000641927 USP27XA6NNY8 438 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 CLASP2O75122 1294 aaKnown RBP18.39■□□□□ 0.53
PHGDH-230ENST00000641927 GABBR2O75899 941 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 ATF6P18850 670 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 GABRB2P47870 512 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 CLCN4P51793 760 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 SLC5A3P53794 718 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 NAP1L1P55209 391 aaKnown RBP18.39■□□□□ 0.53
PHGDH-230ENST00000641927 DNAJC24Q6P3W2 148 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 FAM183BPQ6ZVS7 135 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 ADGRD2Q7Z7M1 963 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 XYLT1Q86Y38 959 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 TCEAL8Q8IYN2 117 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 NUP93Q8N1F7 819 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 KREMEN2Q8NCW0 462 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 SCAMP5Q8TAC9 235 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 SLC7A14Q8TBB6 771 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 MRPL38Q96DV4 380 aaKnown RBP18.39■□□□□ 0.53
PHGDH-230ENST00000641927 TSGA10Q9BZW7 698 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 TLE6Q9H808 572 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 CTTNBP2NLQ9P2B4 639 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 WDR35Q9P2L0 1181 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 YIPF1Q9Y548 306 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 DUSP10Q9Y6W6 482 aa18.39■□□□□ 0.53
PHGDH-230ENST00000641927 COL4A4P53420 1690 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 MACROD2A1Z1Q3 448 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 PAPSS1O43252 624 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 KRT86O43790 486 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 NOP2P46087 812 aaKnown RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 RPL34P49207 117 aaKnown RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 LILRA6Q6PI73 481 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 SELENOOQ9BVL4 669 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 ULBP1Q9BZM6 244 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 PARVAQ9NVD7 372 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 FBXW11Q9UKB1 542 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 GUCA1BQ9UMX6 200 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 INSL5Q9Y5Q6 135 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 PJA2O43164 708 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 ABL1P00519 1130 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 CYP1A2P05177 515 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 C8AP07357 584 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 USP17L7P0C7H9 530 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 MSNP26038 577 aaKnown RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 NRIP1P48552 1158 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 TWF1Q12792 350 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 ZNF268Q14587 947 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 VEPH1Q14D04 833 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 TAF12Q16514 161 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 RAB41Q5JT25 222 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 FAM102AQ5T9C2 384 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 CCDC149Q6ZUS6 474 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 DENND5BQ6ZUT9 1274 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 ZSCAN30Q86W11 494 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 ZDHHC17Q8IUH5 632 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 C3orf20Q8ND61 904 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 NDRG1Q92597 394 aaKnown RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 PPP2R3CQ969Q6 453 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 SPATA17Q96L03 361 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 NUP85Q9BW27 656 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 PRDM12Q9H4Q4 367 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 MRPL47Q9HD33 250 aaKnown RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 AVENQ9NQS1 362 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 MAGED2Q9UNF1 606 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-230ENST00000641927 SCINQ9Y6U3 715 aa18.38■□□□□ 0.53
PHGDH-230ENST00000641927 TRANK1O15050 2925 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 TNFRSF10BO14763 440 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 FBXO21O94952 628 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 GJB6O95452 261 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 ZBED1O96006 694 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 EPCAMP16422 314 aa18.37■□□□□ 0.53
PHGDH-230ENST00000641927 RNASE9P60153 205 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms