RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 FOXQ1Q9C009 403 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 FAM124BQ9H5Z6 455 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-227ENST00000641811 IL37Q9NZH6 218 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 TMEM63CQ9P1W3 806 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 PCDHB4Q9Y5E5 795 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 ZNF318Q5VUA4 2279 aa18.32■□□□□ 0.52
PHGDH-227ENST00000641811 ZNF638Q14966 1978 aaKnown RBP18.31■□□□□ 0.52
PHGDH-227ENST00000641811 ANAPC1Q9H1A4 1944 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 RNF225M0QZC1 329 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-227ENST00000641811 ARNTLO00327 626 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 CHADO15335 359 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 USP17L7P0C7H9 530 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 CD19P15391 556 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 SLC9A1P19634 815 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 AOC1P19801 751 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 PGFP49763 221 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 CLCN5P51795 746 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 STARD6P59095 220 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 APBA1Q02410 837 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 ARHGAP17Q68EM7 881 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 TMEM270Q6UE05 265 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 TPRG1Q6ZUI0 275 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 C11orf57Q6ZUT1 292 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-227ENST00000641811 DNASE1L2Q92874 299 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 KREMEN1Q96MU8 473 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 DUSP16Q9BY84 665 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 RNF38Q9H0F5 515 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 GMIPQ9P107 970 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 HCN4Q9Y3Q4 1203 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 MTF2Q9Y483 593 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-227ENST00000641811 KMT2EQ8IZD2 1858 aa18.31■□□□□ 0.52
PHGDH-227ENST00000641811 SHISA7A6NL88 538 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 PPP3CCP48454 512 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 PRKCQQ04759 706 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 TNK2Q07912 1038 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 GOLGA7BQ2TAP0 167 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 ARHGAP29Q52LW3 1261 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 CT47A1Q5JQC4 288 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-227ENST00000641811 GJB7Q6PEY0 223 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 FAM114A1Q8IWE2 563 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 SHDQ96IW2 340 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 GKN1Q9NS71 199 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 NFE2L3Q9Y4A8 694 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 MYH10P35580 1976 aa18.3■□□□□ 0.52
PHGDH-227ENST00000641811 TICRRQ7Z2Z1 1910 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 COL4A2P08572 1712 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 FAM92AA1XBS5 289 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 KCNJ18B7U540 433 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 OAS1P00973 400 aaKnown RBP18.29■□□□□ 0.52
PHGDH-227ENST00000641811 DCNP07585 359 aaKnown RBP18.29■□□□□ 0.52
PHGDH-227ENST00000641811 SOX9P48436 509 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 ZXDBP98169 803 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 GCNT1Q02742 428 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 KCNJ12Q14500 433 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 ZNF268Q14587 947 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-227ENST00000641811 MAN2A1Q16706 1144 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 SGO2Q562F6 1265 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 MIIPQ5JXC2 388 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 TRIM65Q6PJ69 517 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 GBP6Q6ZN66 633 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 TTC30AQ86WT1 665 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 RBBP8NLQ8NC74 664 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-227ENST00000641811 PDZD8Q8NEN9 1154 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 CSGALNACT1Q8TDX6 532 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 SH3RF2Q8TEC5 729 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 TFAP2BQ92481 460 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 ZSWIM1Q9BR11 485 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 TUBGCP2Q9BSJ2 902 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 DDX23Q9BUQ8 820 aaKnown RBP18.29■□□□□ 0.52
PHGDH-227ENST00000641811 KIF9Q9HAQ2 790 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 UBE2TQ9NPD8 197 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-227ENST00000641811 TRPV5Q9NQA5 729 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 THG1LQ9NWX6 298 aaKnown RBP18.29■□□□□ 0.52
PHGDH-227ENST00000641811 COMMD8Q9NX08 183 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 GTSE1Q9NYZ3 720 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 PIAS3Q9Y6X2 628 aa18.29■□□□□ 0.52
PHGDH-227ENST00000641811 KANSL1LA0AUZ9 987 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 TULP2O00295 520 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 CYP26A1O43174 497 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 VDRP11473 427 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 PRKCSHP14314 528 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-227ENST00000641811 UBXN2BQ14CS0 331 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 ZNF77Q15935 545 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 STX1AQ16623 288 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 TRIM68Q6AZZ1 485 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 CAVIN1Q6NZI2 390 aaKnown RBP18.28■□□□□ 0.52
PHGDH-227ENST00000641811 ANKRD52Q8NB46 1076 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 PRSS33Q8NF86 280 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 ENOX1Q8TC92 643 aaKnown RBP18.28■□□□□ 0.52
PHGDH-227ENST00000641811 OVCA2Q8WZ82 227 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 FAM83CQ9BQN1 747 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 NDST4Q9H3R1 872 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 FBXO44Q9H4M3 255 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 CCSER2Q9H7U1 834 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 ANO10Q9NW15 660 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 SMPD4Q9NXE4 827 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 TSPAN16Q9UKR8 245 aa18.28■□□□□ 0.52
PHGDH-227ENST00000641811 ARHGAP26Q9UNA1 814 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms