RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 LRRC31Q6UY01 552 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 PRUNE1Q86TP1 453 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 RPAINQ86UA6 219 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 SCUBE3Q8IX30 993 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 ACTL9Q8TC94 416 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 PEBP4Q96S96 227 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 CALN1Q9BXU9 219 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 FOXP3Q9BZS1 431 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 CDC42EP4Q9H3Q1 356 aaKnown RBP11.16□□□□□ -0.62
CASC19-230ENST00000641421 RSAD1Q9HA92 442 aa11.16□□□□□ -0.62
CASC19-230ENST00000641421 TLDC2A0PJX2 215 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 SGK1O00141 431 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 GPR182O15218 404 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 CAND2O75155 1236 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 CAPN15O75808 1086 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 GABBR2O75899 941 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 ASGR1P07306 291 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 CD48P09326 243 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 ETS1P14921 441 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 CCND3P30281 292 aaPredicted RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 SDC4P31431 198 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 SCNN1AP37088 669 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 MLH1P40692 756 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 ARSEP51690 589 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 CDH6P55285 790 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 ATP11AP98196 1134 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 GPS1Q13098 491 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 TFDP2Q14188 446 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 KCNA10Q16322 511 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 ZSCAN26Q16670 478 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 BOLA3Q53S33 107 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 UBAP2Q5T6F2 1119 aaKnown RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 HIBCHQ6NVY1 386 aaPredicted RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 CYP4V2Q6ZWL3 525 aaPredicted RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 SMC1BQ8NDV3 1235 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 KLHDC9Q8NEP7 349 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 UHMK1Q8TAS1 419 aaKnown RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 SLC2A14Q8TDB8 520 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 FAM172AQ8WUF8 416 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 TEKT4Q8WW24 435 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.621e-6■□□□□ 10.6
CASC19-230ENST00000641421 TLCD1Q96CP7 247 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 HSFY1Q96LI6 401 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 CFAP57Q96MR6 1250 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 GAD1Q99259 594 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 DDX23Q9BUQ8 820 aaKnown RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 MAK16Q9BXY0 300 aaKnown RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 B3GNT5Q9BYG0 378 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 PCDH9Q9HC56 1237 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 LRRC4CQ9HCJ2 640 aa11.15□□□□□ -0.62
CASC19-230ENST00000641421 NGRNQ9NPE2 291 aaKnown RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.15□□□□□ -0.62
CASC19-230ENST00000641421 TPX2Q9ULW0 747 aaKnown RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.15□□□□□ -0.62
CASC19-230ENST00000641421 MEIS3P2A8K0S8 358 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 APOC4-APOC2K7ER74 178 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 EIF3HO15372 352 aaKnown RBP eCLIP11.14□□□□□ -0.63
CASC19-230ENST00000641421 ENDOD1O94919 500 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 APOC2P02655 101 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 THP07101 528 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 IVLP07476 585 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 ZSCAN5DPP0CG00 497 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 LCP1P13796 627 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 PRKAR2AP13861 404 aaKnown RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 THPOP40225 353 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 PTPN9P43378 593 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 RPL34P49207 117 aaKnown RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 MAGOHP61326 146 aaKnown RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 PPP2R2AP63151 447 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 KRT81Q14533 505 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 PDK2Q15119 407 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 PTGISQ16647 500 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 RAB6CQ53S08 254 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 WSCD1Q658N2 575 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 TTC19Q6DKK2 380 aaPredicted RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 SCYL2Q6P3W7 929 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 SLC26A9Q7LBE3 791 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 MAP7D3Q8IWC1 876 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 ZCCHC9Q8N567 271 aaKnown RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 GLIS1Q8NBF1 620 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 B3GALNT2Q8NCR0 500 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 LPPQ93052 612 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 PGM2Q96G03 612 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 TBCBQ99426 244 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 HNRNPABQ99729 332 aaKnown RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 TMEM121Q9BTD3 319 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 ROPN1BQ9BZX4 212 aaPredicted RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 RAB6CQ9H0N0 254 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 ROPN1Q9HAT0 212 aaPredicted RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 DNAJC17Q9NVM6 304 aaKnown RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 SAE1Q9UBE0 346 aaPredicted RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 GIT1Q9Y2X7 761 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 SMIM23A6NLE4 172 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 RASGRF2O14827 1237 aa11.14□□□□□ -0.63
CASC19-230ENST00000641421 XPO1O14980 1071 aaKnown RBP11.14□□□□□ -0.63
CASC19-230ENST00000641421 MCF2LO15068 1137 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms