RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CHST12Q9NRB3 414 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 SELENONQ9NZV5 590 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 RNF112Q9ULX5 631 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 NPTXRO95502 500 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 NTSR2O95665 410 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 TRMT5Q32P41 509 aaKnown RBP19.12■□□□□ 0.65
SCARB2-213ENST00000638680 JADE3Q92613 823 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 USP13Q92995 863 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-213ENST00000638680 MTMR12Q9C0I1 747 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 ZNF70Q9UC06 446 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-213ENST00000638680 TIMM44O43615 452 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 TADA2AO75478 443 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 CYBBP04839 570 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 PYGMP11217 842 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 LAMC2Q13753 1193 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 AMHR2Q16671 573 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 DEFB107AQ8IZN7 70 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 EIF3LQ9Y262 564 aaKnown RBP19.12■□□□□ 0.65
SCARB2-213ENST00000638680 NCF1BA6NI72 391 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-213ENST00000638680 NCF1CA8MVU1 366 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-213ENST00000638680 NCF1P14598 390 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-213ENST00000638680 PDK2Q15119 407 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 ZNF333Q96JL9 665 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 CRAMP1Q96RY5 1269 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 BTBD10Q9BSF8 475 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 GPR63Q9BZJ6 419 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 ELP3Q9H9T3 547 aa19.12■□□□□ 0.65
SCARB2-213ENST00000638680 RGS5O15539 181 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 GH1P01241 217 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 GSNP06396 782 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 ERVK-9P63128 1117 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 MTFR1Q15390 333 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 STRA8Q7Z7C7 330 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 ZNF280CQ8ND82 737 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 VPS37AQ8NEZ2 397 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 BTN2A2Q8WVV5 523 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 PIK3R5Q8WYR1 880 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 KLHL25Q9H0H3 589 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 C17orf75Q9HAS0 396 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 IMPAD1Q9NX62 359 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 DPP3Q9NY33 737 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 PCDHB8Q9UN66 801 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 MAFGO15525 162 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 CSTF3Q12996 717 aaKnown RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 PLEKHA7Q6IQ23 1121 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 OTOAQ7RTW8 1153 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 CENPLQ8N0S6 344 aaPredicted RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 ATXN2LQ8WWM7 1075 aaKnown RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 SEPT5Q99719 369 aaPredicted RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 GDF3Q9NR23 364 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 NR5A2O00482 541 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 RPL21P46778 160 aaKnown RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 IFI35P80217 286 aaPredicted RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 CHRNB3Q05901 458 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 SLC34A1Q06495 639 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 TBX2Q13207 712 aaPredicted RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 DDX53Q86TM3 631 aaKnown RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 MPP6Q9NZW5 540 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 MEI4A8MW99 385 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 TFRCP02786 760 aaKnown RBP19.11■□□□□ 0.65
SCARB2-213ENST00000638680 GEMP55040 296 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 NFYCQ13952 458 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 WWOXQ9NZC7 414 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 CLCA2Q9UQC9 943 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 FAM205AQ6ZU69 1335 aa19.11■□□□□ 0.65
SCARB2-213ENST00000638680 GPR75-ASB3A0A0A6YYF3 556 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 VWA5AO00534 786 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 SNUPNO95149 360 aaKnown RBP19.1■□□□□ 0.65
SCARB2-213ENST00000638680 FAM200BP0CF97 657 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 CSE1LP55060 971 aaKnown RBP19.1■□□□□ 0.65
SCARB2-213ENST00000638680 TERB1Q8NA31 727 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 CCDC126Q96EE4 140 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 TMEM79Q9BSE2 394 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 CPA3P15088 417 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 PEX5P50542 639 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 ADGRB3O60242 1522 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 CNTFP26441 200 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 ZBTB49Q6ZSB9 765 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 TBC1D19Q8N5T2 526 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 WDCPQ9H6R7 721 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 TRMT6Q9UJA5 497 aaKnown RBP19.1■□□□□ 0.65
SCARB2-213ENST00000638680 C15orf41Q9Y2V0 281 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 CYP2C8P10632 490 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 PAX7P23759 505 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 MMRN1Q13201 1228 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 CACHD1Q5VU97 1274 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 SNX30Q5VWJ9 437 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 MIER2Q8N344 545 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 BLOC1S5Q8TDH9 187 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 GDPD5Q8WTR4 605 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 FAM172AQ8WUF8 416 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 DCLK3Q9C098 648 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 MYLK2Q9H1R3 596 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 LRRC40Q9H9A6 602 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 DYNC1LI2O43237 492 aaPredicted RBP19.1■□□□□ 0.65
SCARB2-213ENST00000638680 CHRNA5P30532 468 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 LUZP2Q86TE4 346 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 MPP4Q96JB8 637 aa19.1■□□□□ 0.65
SCARB2-213ENST00000638680 SLC38A7Q9NVC3 462 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms