RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 HSP90AA1P07900 732 aaKnown RBP19.65■□□□□ 0.74
CLN6-220ENST00000637450 AP3M2P53677 418 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 DNM1Q05193 864 aaKnown RBP19.65■□□□□ 0.74
CLN6-220ENST00000637450 STK4Q13043 487 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 PKP1Q13835 747 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 ADGRG2Q8IZP9 1017 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 CCDC26Q8TAB7 109 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 TMEM174Q8WUU8 243 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 ACDQ96AP0 544 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 ZC3H10Q96K80 434 aaKnown RBP19.65■□□□□ 0.74
CLN6-220ENST00000637450 HHIPQ96QV1 700 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 ARRDC1-AS1Q9H2J1 176 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 EBF1Q9UH73 591 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 SERTAD1Q9UHV2 236 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 LRRIQ3A6PVS8 624 aaPredicted RBP19.64■□□□□ 0.73
CLN6-220ENST00000637450 ABL1P00519 1130 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 C4BPAP04003 597 aaKnown RBP19.64■□□□□ 0.73
CLN6-220ENST00000637450 ZNF806P0C7X5 589 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 OPRD1P41143 372 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 CDH8P55286 799 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 PSMD2Q13200 908 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 DMC1Q14565 340 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 GAB4Q2WGN9 574 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 SLC9A9Q8IVB4 645 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 NUP93Q8N1F7 819 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 PAGE5Q96GU1 130 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 SLITRK1Q96PX8 696 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 SMYD3Q9H7B4 428 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 CPQQ9Y646 472 aa19.64■□□□□ 0.73
CLN6-220ENST00000637450 ATG2BQ96BY7 2078 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 K7EQS6 105 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 ACTN4O43707 911 aaKnown RBP19.63■□□□□ 0.73
CLN6-220ENST00000637450 APBB3O95704 486 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 YWHAQP27348 245 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 BIRC3Q13489 604 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 NCOA4Q13772 614 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 ZNF699Q32M78 642 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 PLK5Q496M5 336 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 FILIP1Q7Z7B0 1213 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 KIAA0895Q8NCT3 520 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 KCNK16Q96T55 309 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 SMPD4Q9NXE4 827 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 GREB1Q4ZG55 1949 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 ANAPC1Q9H1A4 1944 aa19.63■□□□□ 0.73
CLN6-220ENST00000637450 SLC9A3R1O14745 358 aaPredicted RBP19.62■□□□□ 0.73
CLN6-220ENST00000637450 RTN3O95197 1032 aaPredicted RBP19.62■□□□□ 0.73
CLN6-220ENST00000637450 VNN1O95497 513 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 CYP17A1P05093 508 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 DHCR24Q15392 516 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 KMT5BQ4FZB7 885 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 ZNF667Q5HYK9 610 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 PLA2G2CQ5R387 149 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 PAQR9Q6ZVX9 377 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 USP33Q8TEY7 942 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 OVCA2Q8WZ82 227 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 DUSP15Q9H1R2 295 aaPredicted RBP19.62■□□□□ 0.73
CLN6-220ENST00000637450 KCTD10Q9H3F6 313 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 EXOC1Q9NV70 894 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 PCDHGA5Q9Y5G8 931 aa19.62■□□□□ 0.73
CLN6-220ENST00000637450 TPRP12270 2363 aaKnown RBP19.62■□□□□ 0.73
CLN6-220ENST00000637450 TNFRSF10BO14763 440 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 MBL2P11226 248 aaPredicted RBP19.61■□□□□ 0.73
CLN6-220ENST00000637450 IFRD2Q12894 506 aaPredicted RBP19.61■□□□□ 0.73
CLN6-220ENST00000637450 SF3A2Q15428 464 aaKnown RBP19.61■□□□□ 0.73
CLN6-220ENST00000637450 CCDC6Q16204 474 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 RHBDF2Q6PJF5 856 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 FAM35AQ86V20 835 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 DDX42Q86XP3 938 aaKnown RBP eCLIP19.61■□□□□ 0.73
CLN6-220ENST00000637450 PDZD8Q8NEN9 1154 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 FBXO32Q969P5 355 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 ELMO3Q96BJ8 720 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 TNIP3Q96KP6 325 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 SDCBP2Q9H190 292 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 IL37Q9NZH6 218 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 CFAP97Q9P2B7 532 aa19.61■□□□□ 0.73
CLN6-220ENST00000637450 CHORDC1Q9UHD1 332 aaPredicted RBP19.61■□□□□ 0.73
CLN6-220ENST00000637450 ATP8B3O60423 1300 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 ANTXRLA6NF34 631 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 PDXKO00764 312 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 CMA1P23946 247 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 SLC6A11P48066 632 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 LIMK1P53667 647 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 SEC13P55735 322 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 DLG4P78352 724 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 SGSM1Q2NKQ1 1148 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 AASDHQ4L235 1098 aaPredicted RBP19.6■□□□□ 0.73
CLN6-220ENST00000637450 C2orf27AQ580R0 203 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 PPM1JQ5JR12 505 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 SNX30Q5VWJ9 437 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 C12orf50Q8NA57 414 aaPredicted RBP19.6■□□□□ 0.73
CLN6-220ENST00000637450 SPRYD3Q8NCJ5 442 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 TSTD1Q8NFU3 115 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 SCAMP5Q8TAC9 235 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 MED10Q9BTT4 135 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 PTPRDP23468 1912 aa19.6■□□□□ 0.73
CLN6-220ENST00000637450 A0A0A0MRY4 1105 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 A0A1B0GVL5 298 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 SCAMP3O14828 347 aaKnown RBP19.59■□□□□ 0.73
CLN6-220ENST00000637450 DCLK1O15075 740 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 COCHO43405 550 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms