RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 RNF168Q8IYW5 571 aaPredicted RBP16.13■□□□□ 0.17
CLN6-219ENST00000637329 SCML4Q8N228 414 aa16.13■□□□□ 0.17
CLN6-219ENST00000637329 JOSD2Q8TAC2 188 aa16.13■□□□□ 0.17
CLN6-219ENST00000637329 ZNF558Q96NG5 402 aa16.13■□□□□ 0.17
CLN6-219ENST00000637329 CNPY3Q9BT09 278 aa16.13■□□□□ 0.17
CLN6-219ENST00000637329 HCSTQ9UBK5 93 aa16.13■□□□□ 0.17
CLN6-219ENST00000637329 TMEM59LQ9UK28 342 aa16.13■□□□□ 0.17
CLN6-219ENST00000637329 COL4A4P53420 1690 aaPredicted RBP16.13■□□□□ 0.17
CLN6-219ENST00000637329 PTPRDP23468 1912 aa16.13■□□□□ 0.17
CLN6-219ENST00000637329 VWA8A3KMH1 1905 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 C2CD4BA6NLJ0 364 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 GJB6O95452 261 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 FGBP02675 491 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 GLI1P08151 1106 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 SYN1P17600 705 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 GPD1P21695 349 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 PSMA2P25787 234 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 PPM1AP35813 382 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 DNA2P51530 1060 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 PTPROQ16827 1216 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 EFHC1Q5JVL4 640 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 DCAF12L1Q5VU92 463 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 KATNAL2Q8IYT4 538 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 SIX6OS1Q8N1H7 587 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 ALG3Q92685 438 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 KRT35Q92764 455 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 IGSF21Q96ID5 467 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 RNPC3Q96LT9 517 aaKnown RBP16.12■□□□□ 0.17
CLN6-219ENST00000637329 SMOQ99835 787 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLN6-219ENST00000637329 TTPALQ9BTX7 342 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 GPR62Q9BZJ7 368 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 LRRC4Q9HBW1 653 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 CNGB3Q9NQW8 809 aa16.12■□□□□ 0.17
CLN6-219ENST00000637329 PTPRSQ13332 1948 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 HSF2BPO75031 334 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 DAB1O75553 588 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 GABBR2O75899 941 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 ACRP10323 421 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 MAGEA11P43364 429 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 PTPN9P43378 593 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 MAP3K7CLP57077 242 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 OGDHQ02218 1023 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 ADIGQ0VDE8 80 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
CLN6-219ENST00000637329 USP41Q3LFD5 358 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 CTXN3Q4LDR2 81 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 ZNF697Q5TEC3 545 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 KCNT2Q6UVM3 1135 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 VSTM1Q6UX27 236 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 RSRC2Q7L4I2 434 aaKnown RBP16.11■□□□□ 0.17
CLN6-219ENST00000637329 ZMIZ2Q8NF64 920 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 C2orf15Q8WU43 125 aaKnown RBP16.11■□□□□ 0.17
CLN6-219ENST00000637329 BCL7CQ8WUZ0 217 aaPredicted RBP16.11■□□□□ 0.17
CLN6-219ENST00000637329 YME1L1Q96TA2 773 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 TRIM62Q9BVG3 475 aa16.11■□□□□ 0.17
CLN6-219ENST00000637329 HHLA1C9JL84 531 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 PDE2AO00408 941 aaPredicted RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 CEP104O60308 925 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 TBC1D4O60343 1298 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 RNF8O76064 485 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 GJB5O95377 273 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 LCP1P13796 627 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 SDC4P31431 198 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 PCK1P35558 622 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 MRPS5P82675 430 aaKnown RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 HTRA4P83105 476 aaPredicted RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 HADHQ16836 314 aaKnown RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 SLC39A12Q504Y0 691 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 LRRTM3Q86VH5 581 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 TMEM173Q86WV6 379 aaPredicted RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 GPR65Q8IYL9 337 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 SLC39A11Q8N1S5 342 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 COLGALT1Q8NBJ5 622 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 PIK3R5Q8WYR1 880 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 IRGQQ8WZA9 623 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 BADQ92934 168 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 RBM41Q96IZ5 413 aaKnown RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 PIWIL1Q96J94 861 aaKnown RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 TMEM209Q96SK2 561 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 SLC9A7Q96T83 725 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 HERC2P3Q9BVR0 1158 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 AAASQ9NRG9 546 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 TMLHEQ9NVH6 421 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 DDX56Q9NY93 547 aaKnown RBP16.1■□□□□ 0.17
CLN6-219ENST00000637329 PCDHB5Q9Y5E4 795 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 BACE2Q9Y5Z0 518 aa16.1■□□□□ 0.17
CLN6-219ENST00000637329 ZBBXA8MT70 800 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 F8VP50 259 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 CCDC188H7C350 402 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 TRIM66O15016 1216 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 LRCH4O75427 683 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 BEST1O76090 585 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 SOD2P04179 222 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 KRT7P08729 469 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 PDGFRAP16234 1089 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 BDNFP23560 247 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 FLT3P36888 993 aa16.09■□□□□ 0.17
CLN6-219ENST00000637329 PBX3P40426 434 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms