RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TMPRSS4Q9NRS4 437 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 TMEM51Q9NW97 253 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 COMMD8Q9NX08 183 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 ZDHHC7Q9NXF8 308 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 CACNG4Q9UBN1 327 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 HESX1Q9UBX0 185 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 FBXW11Q9UKB1 542 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 GPSM3Q9Y4H4 160 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 ASB3Q9Y575 518 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 PCDHB5Q9Y5E4 795 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 CDY1Q9Y6F8 540 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 MYO9BQ13459 2157 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 OBSL1O75147 1896 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 DENND4AQ7Z401 1863 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 NCANO14594 1321 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 WDR27A2RRH5 827 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 MTMR11A4FU01 709 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 I3L4J1 428 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 O00370 1275 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 FOXN3O00409 490 aaPredicted RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 EPHB6O15197 1021 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 TEX28O15482 410 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 SART1O43290 800 aaKnown RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 LRRN2O75325 713 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CXCL14O95715 111 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 FGF19O95750 216 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 GLUD1P00367 558 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 FAM200BP0CF97 657 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CYP11B1P15538 503 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 RHOQP17081 205 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 NPR3P17342 541 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CD58P19256 250 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CASP14P31944 242 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 OR1D2P34982 312 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 SCNN1AP37088 669 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ACADSBP45954 432 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 RAP1GAPP47736 663 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 KLK7P49862 253 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 FXR1P51114 621 aaKnown RBP eCLIP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CLCN4P51793 760 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 GSCP56915 257 aaPredicted RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ERVFC1P60507 584 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CDR2Q01850 454 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 KLHL30Q0D2K2 578 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CCDC173Q0VFZ6 552 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CAMK1Q14012 370 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ASIC2Q16515 512 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 DUSP6Q16828 381 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 HABP4Q5JVS0 413 aaKnown RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 LIN9Q5TKA1 542 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 PLPP4Q5VZY2 271 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 LILRA6Q6PI73 481 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 TMEM184AQ6ZMB5 413 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 OSTM1Q86WC4 334 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ZDHHC17Q8IUH5 632 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 SPATA2LQ8IUW3 424 aaPredicted RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 TCEAL8Q8IYN2 117 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CCDC170Q8IYT3 715 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 TXLNBQ8N3L3 684 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ANKRD52Q8NB46 1076 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 LEMD2Q8NC56 503 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CMASQ8NFW8 434 aaPredicted RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 GDPD5Q8WTR4 605 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 RABGGTAQ92696 567 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CASP10Q92851 521 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ACDQ96AP0 544 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 TRIM11Q96F44 468 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 PCED1BQ96HM7 432 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 FAM84AQ96KN4 292 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 SPATA17Q96L03 361 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 C8orf48Q96LL4 319 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 KLHL5Q96PQ7 755 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 TRIM62Q9BVG3 475 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ALG13Q9NP73 1137 aaKnown RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 LUC7LQ9NQ29 371 aaKnown RBP7.11□□□□□ -1.27
UPF3B-205ENST00000636792 ZMYM5Q9UJ78 669 aa7.11□□□□□ -1.27
UPF3B-205ENST00000636792 CLUHO75153 1309 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 XPO1O14980 1071 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 THAP12O43422 761 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 RTN3O95197 1032 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CNPP09543 421 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CSH1P0DML2 217 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CSH2P0DML3 217 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 GZMAP12544 262 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CD19P15391 556 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 HOXB8P17481 243 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 PFKLP17858 780 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 DNAJB1P25685 340 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 KLRC2P26717 231 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 ELF1P32519 619 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 PLA2G4AP47712 749 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 PPP3CCP48454 512 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 RPL34P49207 117 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 RNF144AP50876 292 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CDH8P55286 799 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 KCNC3Q14003 757 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 VEPH1Q14D04 833 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 SLC39A12Q504Y0 691 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms