RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SLC40A1Q9NP59 571 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 PIH1D1Q9NWS0 290 aaKnown RBP19.76■□□□□ 0.75
CLN5-216ENST00000636780 DDX56Q9NY93 547 aaKnown RBP19.76■□□□□ 0.75
CLN5-216ENST00000636780 EURLQ9NYK6 297 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 COX16Q9P0S2 106 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 CPA4Q9UI42 421 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 SNX3O60493 162 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 FAM155BO75949 473 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 FSBPO95073 299 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 HMGCRP04035 888 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 MMP3P08254 477 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 YARSP54577 528 aaKnown RBP19.76■□□□□ 0.75
CLN5-216ENST00000636780 SLC1A5Q15758 541 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 DNAJB3Q8WWF6 145 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 XPO7Q9UIA9 1087 aaKnown RBP19.76■□□□□ 0.75
CLN5-216ENST00000636780 SPTLC1O15269 473 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 LCP1P13796 627 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 AGGF1Q8N302 714 aaeCLIP19.75■□□□□ 0.75
CLN5-216ENST00000636780 KIF2BQ8N4N8 673 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 MAML3Q96JK9 1138 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 NT5C1AQ9BXI3 368 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 STMN4Q9H169 189 aaPredicted RBP19.75■□□□□ 0.75
CLN5-216ENST00000636780 DOCK3Q8IZD9 2030 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 H7C0C1 242 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 UBOX5O94941 541 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 KRT7P08729 469 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 IL4RP24394 825 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 ATP5OP48047 213 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 RBP5P82980 135 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 MGAT5Q09328 741 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 ZNF268Q14587 947 aaPredicted RBP19.75■□□□□ 0.75
CLN5-216ENST00000636780 BBS12Q6ZW61 710 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 CTU1Q7Z7A3 348 aaKnown RBP19.75■□□□□ 0.75
CLN5-216ENST00000636780 FBF1Q8TES7 1133 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 PYROXD1Q8WU10 500 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 KHSRPQ92945 711 aaKnown RBP eCLIP19.75■□□□□ 0.75
CLN5-216ENST00000636780 TRABDQ9H4I3 376 aa19.75■□□□□ 0.75
CLN5-216ENST00000636780 DRG1Q9Y295 367 aaKnown RBP19.75■□□□□ 0.75
CLN5-216ENST00000636780 FARP1Q9Y4F1 1045 aaPredicted RBP19.75■□□□□ 0.75
CLN5-216ENST00000636780 C2CD4BA6NLJ0 364 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 VDRP11473 427 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 GPD1P21695 349 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 ACVR2BQ13705 512 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 CCL14Q16627 93 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 CMASQ8NFW8 434 aaPredicted RBP19.74■□□□□ 0.75
CLN5-216ENST00000636780 FAM172AQ8WUF8 416 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 CKAP2Q8WWK9 683 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 PCDH9Q9HC56 1237 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 UBN1Q9NPG3 1134 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 PAPSS1O43252 624 aaPredicted RBP19.74■□□□□ 0.75
CLN5-216ENST00000636780 CPP00450 1065 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 LMNB2Q03252 620 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 DPYSL3Q14195 570 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 STAT4Q14765 748 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 USP50Q70EL3 339 aaPredicted RBP19.74■□□□□ 0.75
CLN5-216ENST00000636780 YTHDF3Q7Z739 585 aaKnown RBP19.74■□□□□ 0.75
CLN5-216ENST00000636780 TRABD2AQ86V40 505 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 PYROXD2Q8N2H3 581 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 NAT8LQ8N9F0 302 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 ASB7Q9H672 318 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 FLRT1Q9NZU1 646 aa19.74■□□□□ 0.75
CLN5-216ENST00000636780 MEIS3P2A8K0S8 358 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 ALOX15BO15296 676 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 KRT4P19013 534 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 ZNF143P52747 638 aaPredicted RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 TAP1Q03518 808 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 CENPUQ71F23 418 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 TBC1D1Q86TI0 1168 aaPredicted RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 EXOC8Q8IYI6 725 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 BBOF1Q8ND07 529 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 PGLYRP2Q96PD5 576 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 CCDC77Q9BR77 488 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.73■□□□□ 0.75
CLN5-216ENST00000636780 RABGEF1Q9UJ41 708 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 MRPL42Q9Y6G3 142 aaKnown RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 SRRM3A6NNA2 597 aaPredicted RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 MAGEB2O15479 319 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 TAC1P20366 129 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 ACAT1P24752 427 aaKnown RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 RBL1P28749 1068 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 AFF1P51825 1210 aaKnown RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 COPS2P61201 443 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 PITX1P78337 314 aaPredicted RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 MORF4L2Q15014 288 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 SOWAHAQ2M3V2 549 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 DRICH1Q6PGQ1 229 aaPredicted RBP19.73■□□□□ 0.75
CLN5-216ENST00000636780 CEP41Q9BYV8 373 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 MAF1Q9H063 256 aa19.73■□□□□ 0.75
CLN5-216ENST00000636780 CLDN5O00501 218 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 KCNN4O15554 427 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 RECQL4O94761 1208 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 ELK3P41970 407 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 TNFAIP2Q03169 654 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 SOX4Q06945 474 aaPredicted RBP19.72■□□□□ 0.75
CLN5-216ENST00000636780 KRT81Q14533 505 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 FAM187BQ17R55 369 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 TRPM8Q7Z2W7 1104 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 POLNQ7Z5Q5 900 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 SPATS2Q86XZ4 545 aaKnown RBP19.72■□□□□ 0.75
CLN5-216ENST00000636780 CCDC110Q8TBZ0 833 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms