RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 TBCBQ99426 244 aa12.21□□□□□ -0.45
TP53-228ENST00000635293 LPIN3Q9BQK8 851 aa12.21□□□□□ -0.45
TP53-228ENST00000635293 HERPUD2Q9BSE4 406 aa12.21□□□□□ -0.45
TP53-228ENST00000635293 FRMD8P1Q9BZ68 369 aaPredicted RBP12.21□□□□□ -0.45
TP53-228ENST00000635293 CRTAC1Q9NQ79 661 aa12.21□□□□□ -0.45
TP53-228ENST00000635293 CACNG4Q9UBN1 327 aa12.21□□□□□ -0.45
TP53-228ENST00000635293 MICAL3Q7RTP6 2002 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 GABBR2O75899 941 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 B3GAT3O94766 335 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 FBXO21O94952 628 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 ACAT1P24752 427 aaKnown RBP12.21□□□□□ -0.46
TP53-228ENST00000635293 MIPP30301 263 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 GYS2P54840 703 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 LMNB2Q03252 620 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 PLEKHG4Q58EX7 1191 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 EFHC1Q5JVL4 640 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 TRNP1Q6NT89 227 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 RTN4RL1Q86UN2 441 aaPredicted RBP12.21□□□□□ -0.46
TP53-228ENST00000635293 FAM35AQ86V20 835 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 VSIG1Q86XK7 387 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 MYCBPAPQ8TBZ2 947 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 TEKT4Q8WW24 435 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 ACBD6Q9BR61 282 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 MED10Q9BTT4 135 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 PLEKHA4Q9H4M7 779 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 KRT82Q9NSB4 513 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 USP18Q9UMW8 372 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 FAN1Q9Y2M0 1017 aa12.21□□□□□ -0.46
TP53-228ENST00000635293 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
TP53-228ENST00000635293 C3orf70A6NLC5 250 aaPredicted RBP12.2□□□□□ -0.46
TP53-228ENST00000635293 PIK3R2O00459 728 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 DAPK3O43293 454 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 HSF2BPO75031 334 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 ATP2C2O75185 946 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 DAB1O75553 588 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 TRUB2O95900 331 aaKnown RBP12.2□□□□□ -0.46
TP53-228ENST00000635293 SYF2O95926 243 aaKnown RBP12.2□□□□□ -0.46
TP53-228ENST00000635293 IL1R2P27930 398 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 HSPA9P38646 679 aaKnown RBP12.2□□□□□ -0.46
TP53-228ENST00000635293 PTK6Q13882 451 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 ATP13A4Q4VNC1 1196 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 TXNRD3NBQ6F5E7 133 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 CD300LGQ6UXG3 332 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 CLEC20AQ6ZU45 233 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 PAQR9Q6ZVX9 377 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 CMASQ8NFW8 434 aaPredicted RBP12.2□□□□□ -0.46
TP53-228ENST00000635293 C1orf54Q8WWF1 131 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 RAPGEF5Q92565 580 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.46
TP53-228ENST00000635293 LRRC45Q96CN5 670 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 HINFPQ9BQA5 517 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 PAAF1Q9BRP4 392 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 B3GNT5Q9BYG0 378 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 SCN5AQ14524 2016 aa12.2□□□□□ -0.46
TP53-228ENST00000635293 ERICH4A6NGS2 130 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 ZNF487B1APH4 448 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 PI4K2BG5E9Z4 385 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 HOXA2O43364 376 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 PRPSAP2O60256 369 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 NBNO60934 754 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 IBSPP21815 317 aaPredicted RBP12.19□□□□□ -0.46
TP53-228ENST00000635293 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 MAPRE1Q15691 268 aaKnown RBP12.19□□□□□ -0.46
TP53-228ENST00000635293 CCDC14Q49A88 953 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 INTS6LQ5JSJ4 861 aaKnown RBP12.19□□□□□ -0.46
TP53-228ENST00000635293 KIAA0319Q5VV43 1072 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 SCUBE3Q8IX30 993 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 TTC13Q8NBP0 860 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 ATL2Q8NHH9 583 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 HEMGNQ9BXL5 484 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 RNF208Q9H0X6 261 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 DPH5Q9H2P9 285 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 ZWILCHQ9H900 591 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 LRRC4Q9HBW1 653 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 CHST7Q9NS84 486 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 TTC3P53804 2025 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 MDM4O15151 490 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 LCP1P13796 627 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 KDELR1P24390 212 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 IGFBP6P24592 240 aaPredicted RBP12.19□□□□□ -0.46
TP53-228ENST00000635293 BRCC3P46736 316 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 KRT17Q04695 432 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 MTMR3Q13615 1198 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 PDK2Q15119 407 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 MTFR1Q15390 333 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 TRADDQ15628 312 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 BOLA3Q53S33 107 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 ALS2CLQ60I27 953 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 OVOS1Q6IE37 1185 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 BBS12Q6ZW61 710 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 ANKRD33Q7Z3H0 272 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 ANKS1BQ7Z6G8 1248 aa12.19□□□□□ -0.46
TP53-228ENST00000635293 DDX42Q86XP3 938 aaKnown RBP eCLIP12.19□□□□□ -0.46
TP53-228ENST00000635293 COLGALT2Q8IYK4 626 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms