RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 KCNT1Q5JUK3 1230 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 ZDHHC17Q8IUH5 632 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 NKD2Q969F2 451 aaPredicted RBP20.62■□□□□ 0.89
TREX1-205ENST00000625293 AAASQ9NRG9 546 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 DRG1Q9Y295 367 aaKnown RBP20.62■□□□□ 0.89
TREX1-205ENST00000625293 GPR182O15218 404 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 HUS1O60921 280 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 RNF8O76064 485 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 ENDOD1O94919 500 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 PDGFRAP16234 1089 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 BCAT1P54687 386 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 CCDC14Q49A88 953 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 ODF2Q5BJF6 829 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 BBS12Q6ZW61 710 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 ATP6V1G3Q96LB4 118 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 TRAIPQ9BWF2 469 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 CYLDQ9NQC7 956 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 SLC38A7Q9NVC3 462 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 PCDH10Q9P2E7 1040 aa20.62■□□□□ 0.89
TREX1-205ENST00000625293 RARGP13631 454 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 ATF2P15336 505 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 MLH1P40692 756 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 SNX16P57768 344 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 LMNB2Q03252 620 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 BYSLQ13895 437 aaKnown RBP20.61■□□□□ 0.89
TREX1-205ENST00000625293 SLMAPQ14BN4 828 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 TAF5Q15542 800 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 TRIP13Q15645 432 aaPredicted RBP20.61■□□□□ 0.89
TREX1-205ENST00000625293 PTGISQ16647 500 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 SH3PXD2AQ5TCZ1 1133 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 EMC10Q5UCC4 262 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 HACE1Q8IYU2 909 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 ALLCQ8N6M5 410 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 CCDC89Q8N998 374 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 SLC35B2Q8TB61 432 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 GAD1Q99259 594 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 TSPYL2Q9H2G4 693 aaPredicted RBP20.61■□□□□ 0.89
TREX1-205ENST00000625293 MIOSQ9NXC5 875 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 PCSK1NQ9UHG2 260 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 GIT1Q9Y2X7 761 aa20.61■□□□□ 0.89
TREX1-205ENST00000625293 HMGB1P1B2RPK0 211 aaPredicted RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 GABRDO14764 452 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 CD48P09326 243 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 IGFBP6P24592 240 aaPredicted RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 SCNN1AP37088 669 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 THPOP40225 353 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 LMAN1P49257 510 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 ARSEP51690 589 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 AFF1P51825 1210 aaKnown RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 VCPP55072 806 aaKnown RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 EIF3BP55884 814 aaKnown RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 CAV1Q03135 178 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 DSC3Q14574 896 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 TRIM71Q2Q1W2 868 aaKnown RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 C15orf59Q2T9L4 293 aaPredicted RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 RAB6CQ53S08 254 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 AGMOQ6ZNB7 445 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 SH2D3CQ8N5H7 860 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 PCSK9Q8NBP7 692 aaKnown RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 FRMD8P1Q9BZ68 369 aaPredicted RBP20.6■□□□□ 0.89
TREX1-205ENST00000625293 RAB6CQ9H0N0 254 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 FRMPD3Q5JV73 1810 aa20.6■□□□□ 0.89
TREX1-205ENST00000625293 CYB561D2O14569 222 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 ZNF623O75123 536 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 ADORA2BP29275 332 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 TKTP29401 623 aaKnown RBP20.59■□□□□ 0.89
TREX1-205ENST00000625293 ITGA8P53708 1063 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 SKOR1P84550 965 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 KCTD16Q68DU8 428 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 ZNF365Q70YC5 407 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 ZNF771Q7L3S4 317 aaPredicted RBP20.59■□□□□ 0.89
TREX1-205ENST00000625293 SCUBE3Q8IX30 993 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 SLC2A14Q8TDB8 520 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 LPPQ93052 612 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 PKNOX2Q96KN3 472 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 TNIP3Q96KP6 325 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 DNAI2Q9GZS0 605 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 SEMA4AQ9H3S1 761 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 PADI3Q9ULW8 664 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 MGEA5O60502 916 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 GRAP2O75791 330 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 ITGAVP06756 1048 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 MYZAPP0CAP1 466 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 CD52P31358 61 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 PTK7Q13308 1070 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 FAM26DQ5JW98 314 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 SLC26A9Q7LBE3 791 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 ARCQ7LC44 396 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 B3GALNT2Q8NCR0 500 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 HSFY1Q96LI6 401 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 HNRNPABQ99729 332 aaKnown RBP20.59■□□□□ 0.89
TREX1-205ENST00000625293 C11orf84Q9BUA3 381 aaPredicted RBP20.59■□□□□ 0.89
TREX1-205ENST00000625293 B3GNT5Q9BYG0 378 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 LRRC4CQ9HCJ2 640 aa20.59■□□□□ 0.89
TREX1-205ENST00000625293 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.59■□□□□ 0.89
TREX1-205ENST00000625293 ARL5CA6NH57 179 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 SHOX2O60902 331 aaPredicted RBP20.58■□□□□ 0.89
TREX1-205ENST00000625293 THP07101 528 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 CHKAP35790 457 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 ADCY8P40145 1251 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms