RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 NKD2Q969F2 451 aaPredicted RBP19.97■□□□□ 0.79
PSPC1-206ENST00000619300 HSFY1Q96LI6 401 aa19.97■□□□□ 0.79
PSPC1-206ENST00000619300 PEBP4Q96S96 227 aa19.97■□□□□ 0.79
PSPC1-206ENST00000619300 HNRNPABQ99729 332 aaKnown RBP19.97■□□□□ 0.79
PSPC1-206ENST00000619300 EPB41L4BQ9H329 900 aa19.97■□□□□ 0.79
PSPC1-206ENST00000619300 TRMT13Q9NUP7 481 aaKnown RBP19.97■□□□□ 0.79
PSPC1-206ENST00000619300 NOD1Q9Y239 953 aa19.97■□□□□ 0.79
PSPC1-206ENST00000619300 CD48P09326 243 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 ACADSBP45954 432 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 LMAN1P49257 510 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 VCPP55072 806 aaKnown RBP19.96■□□□□ 0.79
PSPC1-206ENST00000619300 EIF3BP55884 814 aaKnown RBP19.96■□□□□ 0.79
PSPC1-206ENST00000619300 DSC3Q14574 896 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 LPIN1Q14693 890 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 KCTD16Q68DU8 428 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 BBS12Q6ZW61 710 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 BBOF1Q8ND07 529 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 ATP6V1G3Q96LB4 118 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 SENP8Q96LD8 212 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 CFAP57Q96MR6 1250 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 CACNG4Q9UBN1 327 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 ANAPC5Q9UJX4 755 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 DNAH12Q6ZR08 3092 aa19.96■□□□□ 0.79
PSPC1-206ENST00000619300 PRPSAP2O60256 369 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 MGEA5O60502 916 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 CST8O60676 142 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 ATP2C2O75185 946 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 PTPN1P18031 435 aaKnown RBP19.95■□□□□ 0.78
PSPC1-206ENST00000619300 SDC4P31431 198 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 RPL9P32969 192 aaKnown RBP19.95■□□□□ 0.78
PSPC1-206ENST00000619300 VPS41P49754 854 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 RAB27AP51159 221 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 CLCNKBP51801 687 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 ITGA8P53708 1063 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 ATP11AP98196 1134 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 OASLQ15646 514 aaKnown RBP19.95■□□□□ 0.78
PSPC1-206ENST00000619300 CDO1Q16878 200 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 TRIM71Q2Q1W2 868 aaKnown RBP19.95■□□□□ 0.78
PSPC1-206ENST00000619300 RAB6CQ53S08 254 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 FAM26DQ5JW98 314 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 CYP4V2Q6ZWL3 525 aaPredicted RBP19.95■□□□□ 0.78
PSPC1-206ENST00000619300 TTC13Q8NBP0 860 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 RAET1EQ8TD07 263 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 CCHCR1Q8TD31 782 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 HAUS1Q96CS2 278 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 FRMD8P1Q9BZ68 369 aaPredicted RBP19.95■□□□□ 0.78
PSPC1-206ENST00000619300 RAB6CQ9H0N0 254 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 TSPYL1Q9H0U9 437 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 SEMA4AQ9H3S1 761 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 A0A0U1RQF3 1178 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 HMGB1P1B2RPK0 211 aaPredicted RBP19.95■□□□□ 0.78
PSPC1-206ENST00000619300 ENDOD1O94919 500 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 ITGAVP06756 1048 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 NUDT17P0C025 328 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 SCNN1AP37088 669 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 SCNN1GP51170 649 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 BOLA3Q53S33 107 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 ARCQ7LC44 396 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 ALLCQ8N6M5 410 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 SLC35B2Q8TB61 432 aa19.95■□□□□ 0.78
PSPC1-206ENST00000619300 LCP1P13796 627 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 DESP17661 470 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 TKTP29401 623 aaKnown RBP19.94■□□□□ 0.78
PSPC1-206ENST00000619300 DYNLT1P63172 113 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 PLCB3Q01970 1234 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 DENND2CQ68D51 928 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 SLC26A9Q7LBE3 791 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 FUKQ8N0W3 1084 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 SH2D3CQ8N5H7 860 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 PXYLP1Q8TE99 480 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 NCAPGQ9BPX3 1015 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 DUSP16Q9BY84 665 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 RSAD1Q9HA92 442 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 AAASQ9NRG9 546 aa19.94■□□□□ 0.78
PSPC1-206ENST00000619300 XPO1O14980 1071 aaKnown RBP19.93■□□□□ 0.78
PSPC1-206ENST00000619300 ACAT1P24752 427 aaKnown RBP19.93■□□□□ 0.78
PSPC1-206ENST00000619300 SLC8A3P57103 927 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 IFFO1Q0D2I5 559 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 RFX6Q8HWS3 928 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 TMEM86AQ8N2M4 240 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 ACTL9Q8TC94 416 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 FAM172AQ8WUF8 416 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 ADAM2Q99965 735 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 CALN1Q9BXU9 219 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 CREBZFQ9NS37 354 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.93■□□□□ 0.78
PSPC1-206ENST00000619300 LHX1P48742 406 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 ARSEP51690 589 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 CDH6P55285 790 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 OTUD4Q01804 1114 aaKnown RBP19.93■□□□□ 0.78
PSPC1-206ENST00000619300 SLC29A2Q14542 456 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 SCYL2Q6P3W7 929 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 PRUNE1Q86TP1 453 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 CCDC25Q86WR0 208 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 RNF169Q8NCN4 708 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 CLEC4CQ8WTT0 213 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 MAK16Q9BXY0 300 aaKnown RBP19.93■□□□□ 0.78
PSPC1-206ENST00000619300 CENPHQ9H3R5 247 aa19.93■□□□□ 0.78
PSPC1-206ENST00000619300 NGRNQ9NPE2 291 aaKnown RBP19.93■□□□□ 0.78
PSPC1-206ENST00000619300 DDX43Q9NXZ2 648 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms