RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 FKBP3Q00688 224 aaKnown RBP12.64□□□□□ -0.39
SRRT-216ENST00000618262 PDE1BQ01064 536 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 IGSF11Q5DX21 431 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 ARMC4Q5T2S8 1044 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 LRRC55Q6ZSA7 311 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 ADAM2Q99965 735 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 STRA6Q9BX79 667 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 CCDC113Q9H0I3 377 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 PDZD7Q9H5P4 517 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 PLEKHA5Q9HAU0 1116 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 HEY1Q9Y5J3 304 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 CETN3O15182 167 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 CALUO43852 315 aaPredicted RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 GCLMP48507 274 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 KLHL30Q0D2K2 578 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 SNRNP35Q16560 246 aaKnown RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 TRIM65Q6PJ69 517 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 PLEKHO2Q8TD55 490 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 PCMTD1Q96MG8 357 aaPredicted RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 ANKRD27Q96NW4 1050 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 CDT1Q9H211 546 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 FZD8Q9H461 694 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 TMEM206Q9H813 350 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 C17orf75Q9HAS0 396 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 SNX5Q9Y5X3 404 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 A0A0C4DFX4 3053 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 CHD9Q3L8U1 2897 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 ZW10O43264 779 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 MAP3K7O43318 606 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 GAS2O43903 313 aaKnown RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 BAIAP3O94812 1187 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 KRT31Q15323 416 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 AADATQ8N5Z0 425 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 MAML1Q92585 1016 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 POM121Q96HA1 1249 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 HCSTQ9UBK5 93 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 CHMP2BQ9UQN3 213 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■□□□□ 11.2
SRRT-216ENST00000618262 HNRNPRO43390 633 aaKnown RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 TACC1O75410 805 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 CLTBP09497 229 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 HAAOP46952 286 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 GATMP50440 423 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 EFNA5P52803 228 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 NKX3-2P78367 333 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 FANCCQ00597 558 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 GNA13Q14344 377 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 GPNMBQ14956 572 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 TRIM71Q2Q1W2 868 aaKnown RBP12.63□□□□□ -0.39
SRRT-216ENST00000618262 BTN2A1Q7KYR7 527 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 GOLGA2P5Q9HBQ8 144 aa12.63□□□□□ -0.39
SRRT-216ENST00000618262 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.63□□□□□ -0.39
SRRT-216ENST00000618262 PDXKO00764 312 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 TMCC2O75069 709 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 CD4P01730 458 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 SLC4A1P02730 911 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 KRT10P13645 584 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 TNNI1P19237 187 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 SFPQP23246 707 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRRT-216ENST00000618262 IGFBP6P24592 240 aaPredicted RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 KRT83P78385 493 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 TFAMQ00059 246 aaKnown RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 RIPK1Q13546 671 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 ANKDD1AQ495B1 522 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 PAN2Q504Q3 1202 aaKnown RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 TCP11X2Q5H9J9 407 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 XXYLT1Q8NBI6 393 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 RSAD2Q8WXG1 361 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 BPIFA3Q9BQP9 254 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 TUBGCP2Q9BSJ2 902 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 UBN1Q9NPG3 1134 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 PRMT7Q9NVM4 692 aaPredicted RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 LOC105371267A0A1B0GV96 52 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 TOM1L1O75674 476 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 FGFR1P11362 822 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 HSD17B2P37059 387 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 NR2C2P49116 596 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 ELF3P78545 371 aaPredicted RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 HSP90AA5PQ58FG0 334 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 MILR1Q7Z6M3 343 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 PI4K2AQ9BTU6 479 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 CEP44Q9C0F1 390 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 C2orf40Q9H1Z8 148 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 PIH1D1Q9NWS0 290 aaKnown RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
SRRT-216ENST00000618262 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
SRRT-216ENST00000618262 LOXHD1Q8IVV2 1947 aa12.61□□□□□ -0.39
SRRT-216ENST00000618262 ZBBXA8MT70 800 aa12.61□□□□□ -0.39
SRRT-216ENST00000618262 TLR3O15455 904 aaKnown RBP12.61□□□□□ -0.39
SRRT-216ENST00000618262 STAG3L1P0CL83 205 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms