RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CDH7Q9ULB5 785 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 DIS3Q9Y2L1 958 aaKnown RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 SCN2BO60939 215 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 SLC25A27O95847 323 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 ATP5BP06576 529 aaKnown RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 GEMIN4P57678 1058 aaKnown RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 CENPLQ8N0S6 344 aaPredicted RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 CDADC1Q9BWV3 514 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 RNF26Q9BY78 433 aaPredicted RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 WDCPQ9H6R7 721 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 SH3BP4Q9P0V3 963 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 RIMKLBQ9ULI2 386 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 PMPCBO75439 489 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 PLGP00747 810 aaPredicted RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 COX7A2P14406 83 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 CTNNB1P35222 781 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 CASP9P55211 416 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 RAB2AP61019 212 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 SCARF1Q14162 830 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 KLHL12Q53G59 568 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 MSANTD1Q6ZTZ1 278 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 SGCDQ92629 289 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 BHLHE41Q9C0J9 482 aaPredicted RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 TLR8Q9NR97 1041 aaKnown RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 MGAT4AQ9UM21 535 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 SF3B1O75533 1304 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■■■ 94.9
TCF4-248ENST00000616053 CBX4O00257 560 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 ZSWIM7Q19AV6 140 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 LRRC8DQ7L1W4 858 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 P4HA3Q7Z4N8 544 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 RPH3AQ9Y2J0 694 aaPredicted RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 IGSF9BQ9UPX0 1349 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 E2F8A0AVK6 867 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 MAGEB3O15480 346 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 SERPINB1P30740 379 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 TEAD4Q15561 434 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 G2E3Q7L622 706 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 LXNQ9BS40 222 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 TEX13BQ9BXU2 312 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 A0A087WZ62 844 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 C19orf81C9J6K1 198 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 SNPHO15079 494 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 CXorf40AQ8TE69 158 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 GPRASP2Q96D09 838 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 HCN3Q9P1Z3 774 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 CHP2O43745 196 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 PDGFRAP16234 1089 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 PSMD4P55036 377 aaKnown RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 OLFML2AQ68BL7 652 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 ANKRD13AQ8IZ07 590 aa13.06□□□□□ -0.32
TCF4-248ENST00000616053 CDK5RAP1Q96SZ6 601 aaKnown RBP13.06□□□□□ -0.32
TCF4-248ENST00000616053 GOLGA4Q13439 2230 aaKnown RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 PDHA2P29803 388 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 SCRN3Q0VDG4 424 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 RIN1Q13671 783 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 MRNIPQ6NTE8 343 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 TCF25Q9BQ70 676 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 DSEQ9UL01 958 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 PRKAB1Q9Y478 270 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 A0A096LPK6 155 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 RPL9P32969 192 aaKnown RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 TMEM164Q5U3C3 297 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 BNIPLQ7Z465 357 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 CYFIP2Q96F07 1278 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 EDC3Q96F86 508 aaKnown RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 COMMD9Q9P000 198 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 IGHDP01880 384 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 ALBP02768 609 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 PDK1Q15118 436 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 ZNF280DQ6N043 979 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 EFCAB12Q6NXP0 572 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 NEK5Q6P3R8 708 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 OR7A10O76100 309 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 CYP2A7P20853 494 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 FAM9CQ8IZT9 166 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 TSC22D3Q99576 134 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 DCLK1O15075 740 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 ATP5HO75947 161 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 GUCY2CP25092 1073 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 HPS6Q86YV9 775 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 ITCHQ96J02 903 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
TCF4-248ENST00000616053 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 MBD2Q9UBB5 411 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 GRAP2O75791 330 aa13.05□□□□□ -0.32
TCF4-248ENST00000616053 NR3C1P04150 777 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 516.4 ms