RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CACNA2D1P54289 1103 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 TAF10Q12962 218 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 TDRD10Q5VZ19 366 aaKnown RBP18.92■□□□□ 0.62
SSBP1-215ENST00000612337 HSCBQ8IWL3 235 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 B3GALNT2Q8NCR0 500 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 SLITRK1Q96PX8 696 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 B3GNT5Q9BYG0 378 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 RNF38Q9H0F5 515 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 TMEM30AQ9NV96 361 aa18.92■□□□□ 0.62
SSBP1-215ENST00000612337 NXF1Q9UBU9 619 aaKnown RBP18.92■□□□□ 0.62
SSBP1-215ENST00000612337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.91■□□□□ 0.62
SSBP1-215ENST00000612337 PHACTR2O75167 634 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 APBB3O95704 486 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 OAS1P00973 400 aaKnown RBP18.91■□□□□ 0.62
SSBP1-215ENST00000612337 HSP90AA1P07900 732 aaKnown RBP18.91■□□□□ 0.62
SSBP1-215ENST00000612337 ZNF806P0C7X5 589 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 CASP4P49662 377 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 PSMD2Q13200 908 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 DMC1Q14565 340 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 FILIP1Q7Z7B0 1213 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 CEP57L1Q8IYX8 460 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 PLEKHO2Q8TD55 490 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 EBF1Q9UH73 591 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 CFAP45Q9UL16 551 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 PCDHGA5Q9Y5G8 931 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 CPQQ9Y646 472 aa18.91■□□□□ 0.62
SSBP1-215ENST00000612337 LRRIQ3A6PVS8 624 aaPredicted RBP18.9■□□□□ 0.62
SSBP1-215ENST00000612337 CLDN5O00501 218 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 SLC9A3R1O14745 358 aaPredicted RBP18.9■□□□□ 0.62
SSBP1-215ENST00000612337 KLRC4O43908 158 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 ABL1P00519 1130 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 SLFN14P0C7P3 912 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 OPRD1P41143 372 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 LIMK1P53667 647 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 CLDN10P78369 228 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 BIRC3Q13489 604 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 GAB4Q2WGN9 574 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 PLK5Q496M5 336 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 AASDHQ4L235 1098 aaPredicted RBP18.9■□□□□ 0.62
SSBP1-215ENST00000612337 GRAMD1CQ8IYS0 662 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 ADGRG2Q8IZP9 1017 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 NUP93Q8N1F7 819 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 PARD3BQ8TEW8 1205 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 TMEM174Q8WUU8 243 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 SMYD3Q9H7B4 428 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 RCOR1Q9UKL0 485 aa18.9■□□□□ 0.62
SSBP1-215ENST00000612337 K7EQS6 105 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 ACTN4O43707 911 aaKnown RBP18.89■□□□□ 0.61
SSBP1-215ENST00000612337 RTN3O95197 1032 aaPredicted RBP18.89■□□□□ 0.61
SSBP1-215ENST00000612337 CYP17A1P05093 508 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 ADRB1P08588 477 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 YWHAQP27348 245 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 IFRD2Q12894 506 aaPredicted RBP18.89■□□□□ 0.61
SSBP1-215ENST00000612337 STK4Q13043 487 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 NCOA4Q13772 614 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 SF3A2Q15428 464 aaKnown RBP18.89■□□□□ 0.61
SSBP1-215ENST00000612337 ZNF699Q32M78 642 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 ZNF667Q5HYK9 610 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 PPM1JQ5JR12 505 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 PLA2G2CQ5R387 149 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 DDX42Q86XP3 938 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSBP1-215ENST00000612337 SLC9A9Q8IVB4 645 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 C12orf50Q8NA57 414 aaPredicted RBP18.89■□□□□ 0.61
SSBP1-215ENST00000612337 KIAA0895Q8NCT3 520 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 PDZD8Q8NEN9 1154 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 USP33Q8TEY7 942 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 OVCA2Q8WZ82 227 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 DMAC2Q9NW81 257 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 SMPD4Q9NXE4 827 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 CHD8Q9HCK8 2581 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 ATP8B3O60423 1300 aa18.89■□□□□ 0.61
SSBP1-215ENST00000612337 C4BPAP04003 597 aaKnown RBP18.88■□□□□ 0.61
SSBP1-215ENST00000612337 CDH8P55286 799 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 DNM1Q05193 864 aaKnown RBP18.88■□□□□ 0.61
SSBP1-215ENST00000612337 PKP1Q13835 747 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 DHCR24Q15392 516 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 CCDC6Q16204 474 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 TSTD1Q8NFU3 115 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 DDX1Q92499 740 aaKnown RBP18.88■□□□□ 0.61
SSBP1-215ENST00000612337 PAGE5Q96GU1 130 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 TNIP3Q96KP6 325 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 DUSP15Q9H1R2 295 aaPredicted RBP18.88■□□□□ 0.61
SSBP1-215ENST00000612337 EXOC1Q9NV70 894 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 CFAP97Q9P2B7 532 aa18.88■□□□□ 0.61
SSBP1-215ENST00000612337 CLSTN1O94985 981 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 VNN1O95497 513 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 MBL2P11226 248 aaPredicted RBP18.87■□□□□ 0.61
SSBP1-215ENST00000612337 MPLP40238 635 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 CACNA1BQ00975 2339 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 ELF2Q15723 593 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 IL31Q6EBC2 164 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 PAQR9Q6ZVX9 377 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 FAM35AQ86V20 835 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 FBXO32Q969P5 355 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 SMARCD1Q96GM5 515 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 CNTNAP3BQ96NU0 1288 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 KCNK16Q96T55 309 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 CNTNAP3Q9BZ76 1288 aa18.87■□□□□ 0.61
SSBP1-215ENST00000612337 KCTD10Q9H3F6 313 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms